RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 PLAURQ03405 335 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 ZNF343Q6P1L6 599 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 RNF113BQ8IZP6 322 aaKnown RBP12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 FAM174AQ8TBP5 190 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 MR1Q95460 341 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 GAL3ST3Q96A11 431 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 CASD1Q96PB1 797 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 CHD7Q9P2D1 2997 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 CHRNA9Q9UGM1 479 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 CES1P1Q9UKY3 287 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 GTF2A1LQ9UNN4 478 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 EML5Q05BV3 1969 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 TBC1D3DA0A087WVF3 549 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 TBC1D3IA0A087WXS9 549 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 A0A1W2PPV9 198 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 TBC1D3BA6NDS4 549 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 TBC1D3FA6NER0 549 aaPredicted RBP12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 TBC1D3LB9A6J9 549 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 UPK3AO75631 287 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 TBC1D3HP0C7X1 549 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 FABP4P15090 132 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 HPGDP15428 266 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 CCKBRP32239 447 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 PCP4P48539 62 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 CSNK1G2P78368 415 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 TBC1D3GQ6DHY5 549 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 TBC1D3CQ6IPX1 549 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 MFSD12Q6NUT3 480 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 HIST2H3AQ71DI3 136 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 NRROSQ86YC3 692 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 TBC1D3Q8IZP1 549 aaPredicted RBP12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 TMEM104Q8NE00 496 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 SAT2Q96F10 170 aaPredicted RBP12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 TCTN2Q96GX1 697 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 ZNF426Q9BUY5 554 aa12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 CGGBP1Q9UFW8 167 aaPredicted RBP12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 GDF2Q9UK05 429 aaPredicted RBP12.79□□□□□ -0.36
COL6A4P2-202ENST00000504443 UMAD1C9J7I0 102 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 CDC40O60508 579 aaKnown RBP eCLIP12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 OR2C1O95371 312 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 GPANK1O95872 356 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 F10P00742 488 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 MELTFP08582 738 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 PI3P19957 117 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 GJA4P35212 333 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 ID2Q02363 134 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 SLC9A3R2Q15599 337 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 RAB11BQ15907 218 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 ZNF674Q2M3X9 581 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 KHDC3LQ587J8 217 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 SHISA5Q8N114 240 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 LINC01555Q8NAE3 123 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 CMBLQ96DG6 245 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 SDF2Q99470 211 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 VN1R3Q9BXE9 311 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 OR52A5Q9H2C5 316 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 CRLF2Q9HC73 371 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 SAGE1Q9NXZ1 904 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 GSKIPQ9P0R6 139 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 SLC25A13Q9UJS0 675 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 PUS1Q9Y606 427 aaKnown RBP eCLIP12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 CD1AP06126 327 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 QDPRP09417 244 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 HIST1H1TP22492 207 aaPredicted RBP12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 FHITP49789 147 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 PKIAP61925 76 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 DHCR24Q15392 516 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 SLC48A1Q6P1K1 146 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 NPEPL1Q8NDH3 523 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 TSEN15Q8WW01 171 aaKnown RBP12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 ZNF587Q96SQ5 575 aaPredicted RBP12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 PELI2Q9HAT8 420 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 ADAM29Q9UKF5 820 aa12.78□□□□□ -0.36
COL6A4P2-202ENST00000504443 TSTD3H0UI37 97 aa12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 PHOX2AO14813 284 aa12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 EFSO43281 561 aa12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 ZNF432O94892 652 aa12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 PLGP00747 810 aaPredicted RBP12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 ZNF385CQ66K41 422 aaPredicted RBP12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 TMEM25Q86YD3 366 aa12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 ACBD4Q8NC06 268 aa12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 RPS4Y2Q8TD47 263 aa12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 SLC25A36Q96CQ1 311 aa12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 ZNF681Q96N22 645 aa12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 C2orf88Q9BSF0 95 aa12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 SLC17A9Q9BYT1 436 aa12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 TUBA4BQ9H853 241 aa12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 SRA1Q9HD15 236 aaKnown RBP12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 FLRT3Q9NZU0 649 aa12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 IL36AQ9UHA7 158 aa12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 FBXO7Q9Y3I1 522 aa12.77□□□□□ -0.36
COL6A4P2-202ENST00000504443 TICRRQ7Z2Z1 1910 aa12.77□□□□□ -0.37
COL6A4P2-202ENST00000504443 LOC100289279A0A1B0GTE1 492 aa12.77□□□□□ -0.37
COL6A4P2-202ENST00000504443 FKTNO75072 461 aa12.77□□□□□ -0.37
COL6A4P2-202ENST00000504443 STK17BO94768 372 aa12.77□□□□□ -0.37
COL6A4P2-202ENST00000504443 HCKP08631 526 aa12.77□□□□□ -0.37
COL6A4P2-202ENST00000504443 BCL6P41182 706 aa12.77□□□□□ -0.37
COL6A4P2-202ENST00000504443 S100A10P60903 97 aa12.77□□□□□ -0.37
COL6A4P2-202ENST00000504443 RPS23P62266 143 aaKnown RBP12.77□□□□□ -0.37
COL6A4P2-202ENST00000504443 GAS6Q14393 721 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms