RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 C12orf71A8MTZ7 269 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 H0YJX3 145 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 M0R1B8 84 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 LY6G6DO95868 133 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 TFP02787 698 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 SCG5P05408 212 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 CBR1P16152 277 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 ZNF32P17041 273 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 ARR3P36575 388 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 CAPGP40121 348 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 VHLP40337 213 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 IDH3GP51553 393 aaPredicted RBP8.73□□□□□ -1.01
NUP54-203ENST00000504173 PCBD1P61457 104 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 LSM6P62312 80 aaKnown RBP8.73□□□□□ -1.01
NUP54-203ENST00000504173 RAB1AP62820 205 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 EFNB1P98172 346 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 APOFQ13790 326 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 ENDOGQ14249 297 aaKnown RBP8.73□□□□□ -1.01
NUP54-203ENST00000504173 KCNMB1Q16558 191 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 SLC35D3Q5M8T2 416 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 LINC01590Q5TEZ4 76 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 LCN1P1Q5VSP4 162 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 NXNL2Q5VZ03 156 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 UGT2A3Q6UWM9 527 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 LYPD4Q6UWN0 246 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 IZUMO2Q6UXV1 221 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 BCDIN3DQ7Z5W3 292 aaKnown RBP8.73□□□□□ -1.01
NUP54-203ENST00000504173 GID4Q8IVV7 300 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 ZNF511Q8NB15 262 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 FGFBP3Q8TAT2 258 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 ZNRF4Q8WWF5 429 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 TRUB1Q8WWH5 349 aaKnown RBP8.73□□□□□ -1.01
NUP54-203ENST00000504173 UBE2FQ969M7 185 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 ZMYND19Q96E35 227 aaPredicted RBP8.73□□□□□ -1.01
NUP54-203ENST00000504173 FBXO17Q96EF6 278 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 RASSF1Q9NS23 344 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 MRPL22Q9NWU5 206 aaKnown RBP8.73□□□□□ -1.01
NUP54-203ENST00000504173 B3GNT2Q9NY97 397 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 NPAP1Q9NZP6 1156 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 KCNG2Q9UJ96 466 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 MOKQ9UQ07 419 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 COMMD3-BMI1R4GMX3 469 aa8.73□□□□□ -1.01
NUP54-203ENST00000504173 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.72□□□□□ -1.01
NUP54-203ENST00000504173 CCDC182A6NF36 153 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 H0YAE9 185 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 MPZL2O60487 215 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 CLIC3O95833 236 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 HRGP04196 525 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 MMP7P09237 267 aaPredicted RBP8.72□□□□□ -1.01
NUP54-203ENST00000504173 SPARCP09486 303 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 SLC2A5P22732 501 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 DNASE1P24855 282 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 GSTT1P30711 240 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 HSPA13P48723 471 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 ENTPD1P49961 510 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 CDH11P55287 796 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 SNRPGP62308 76 aaKnown RBP8.72□□□□□ -1.01
NUP54-203ENST00000504173 ADARB1P78563 741 aaKnown RBP8.72□□□□□ -1.01
NUP54-203ENST00000504173 IL5RAQ01344 420 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 PLP2Q04941 152 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 SCRN3Q0VDG4 424 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 IL18R1Q13478 541 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 AQP6Q13520 282 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 SNCBQ16143 134 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 BEX5Q5H9J7 111 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 AADACL4Q5VUY2 407 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 ZNF691Q5VV52 312 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 SEZ6L2Q6UXD5 910 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 TMEM108Q6UXF1 575 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 B3GLCTQ6Y288 498 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 SYT9Q86SS6 491 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 ERI1Q8IV48 349 aaKnown RBP8.72□□□□□ -1.01
NUP54-203ENST00000504173 ENTHD1Q8IYW4 607 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 SETD9Q8NE22 299 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 OR2AJ1Q8NGZ0 328 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 PLPPR2Q96GM1 343 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 ZNF582Q96NG8 517 aaPredicted RBP8.72□□□□□ -1.01
NUP54-203ENST00000504173 INTS14Q96SY0 518 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 WACQ9BTA9 647 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 CDADC1Q9BWV3 514 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 ESRP2Q9H6T0 727 aaKnown RBP8.72□□□□□ -1.01
NUP54-203ENST00000504173 WDR76Q9H967 626 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 NOX3Q9HBY0 568 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 DNAJC27Q9NZQ0 273 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 CRNNQ9UBG3 495 aaPredicted RBP8.72□□□□□ -1.01
NUP54-203ENST00000504173 ASH2LQ9UBL3 628 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 FBXL3Q9UKT7 428 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 EDARQ9UNE0 448 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 TIMM10BQ9Y5J6 103 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 PRR14LQ5THK1 2151 aa8.72□□□□□ -1.01
NUP54-203ENST00000504173 IGHV1-18A0A0C4DH31 117 aa8.71□□□□□ -1.02
NUP54-203ENST00000504173 IQCMA0A1B0GVH7 501 aa8.71□□□□□ -1.02
NUP54-203ENST00000504173 SLC22A31A6NKX4 558 aa8.71□□□□□ -1.02
NUP54-203ENST00000504173 A6NNC1 897 aa8.71□□□□□ -1.02
NUP54-203ENST00000504173 DEFB108AA8MXU0 73 aa8.71□□□□□ -1.02
NUP54-203ENST00000504173 ZNF593O00488 134 aaPredicted RBP8.71□□□□□ -1.02
NUP54-203ENST00000504173 SELENOFO60613 162 aa8.71□□□□□ -1.02
NUP54-203ENST00000504173 TMCC2O75069 709 aa8.71□□□□□ -1.02
NUP54-203ENST00000504173 IGKV3-15P01624 115 aa8.71□□□□□ -1.02
NUP54-203ENST00000504173 IGLV1-44P01699 117 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms