RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 HCCSP53701 268 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 TNK1Q13470 666 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 SNTB1Q13884 538 aaKnown RBP4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 RNPS1Q15287 305 aaKnown RBP4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 SHBQ15464 509 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 ZNF74Q16587 644 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 SMN1Q16637 294 aaKnown RBP4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 CDKN3Q16667 212 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 TBC1D28Q2M2D7 210 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 FAM209AQ5JX71 171 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 SYT9Q86SS6 491 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 SKA3Q8IX90 412 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 MSRB3Q8IXL7 192 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 ZFP41Q8N8Y5 198 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 GATSQ8NAP1 163 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 OTOSQ8NHW6 89 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 EDARADDQ8WWZ3 215 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 MUCL1Q96DR8 90 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 GPX7Q96SL4 187 aaPredicted RBP4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 TMPRSS13Q9BYE2 586 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 PATZ1Q9HBE1 687 aaKnown RBP4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 RAB18Q9NP72 206 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 WSB2Q9NYS7 404 aaPredicted RBP4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 TP53TG5Q9Y2B4 290 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 TMA7Q9Y2S6 64 aaKnown RBP4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 POLR2AP24928 1970 aaKnown RBP4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 MIA3Q5JRA6 1907 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 TRIP11Q15643 1979 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 TERTO14746 1132 aaKnown RBP4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 B4GAT1O43505 415 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 NDUFB6O95139 128 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 APOC3P02656 99 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 CSN2P05814 226 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 PSMB5P28074 263 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 CYB561P49447 251 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 FUT6P51993 359 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 CLDN6P56747 220 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 CARD18P57730 90 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 CD81P60033 236 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 RAE1P78406 368 aaKnown RBP4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 ZNF85Q03923 595 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 ZP4Q12836 540 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 HTR4Q13639 388 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 TMEM30BQ3MIR4 351 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 PLCXD3Q63HM9 321 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 ACSM5Q6NUN0 579 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 WDR74Q6RFH5 385 aaPredicted RBP4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 DLK2Q6UY11 383 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 GALNT10Q86SR1 603 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 IQCF2Q8IXL9 164 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 SUMF2Q8NBJ7 301 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 SLC38A9Q8NBW4 561 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 OR13C8Q8NGS7 320 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 OR2G2Q8NGZ5 317 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 CD300LFQ8TDQ1 290 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 RBPMSQ93062 196 aaKnown RBP4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 SARAFQ96BY9 339 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 SAT2Q96F10 170 aaPredicted RBP4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 CNRIP1Q96F85 164 aaPredicted RBP4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 C2orf50Q96LR7 162 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 WDR54Q9H977 334 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 TBC1D29Q9UFV1 150 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 ZNF225Q9UK10 706 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 CCL26Q9Y258 94 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 SIT1Q9Y3P8 196 aa4.32□□□□□ -1.72
NDFIP1-202ENST00000503388 NUMA1Q14980 2115 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 PLSCR5A0PG75 271 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 DCDC2BA2VCK2 349 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 A6NCN8 305 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 DHRS7CA6NNS2 312 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 EEF1E1-BLOC1S5C9J1V9 151 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 PRRT4C9JH25 899 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 J3QW42 95 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 SOCS6O14544 535 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 TXNDC12O95881 172 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 HOXB1P14653 301 aaPredicted RBP4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 MTCP1P56278 107 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 RAB35Q15286 201 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 OR7E24Q6IFN5 339 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 FBXW12Q6X9E4 464 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 ESPNLQ6ZVH7 1005 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 GDPD3Q7L5L3 318 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 LYG2Q86SG7 212 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 CD163Q86VB7 1156 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 CADM3Q8N126 398 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 GABRG1Q8N1C3 465 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 GALNT16Q8N428 558 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 CISD2Q8N5K1 135 aaKnown RBP4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 ACBD4Q8NC06 268 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 OR13H1Q8NG92 308 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 OR56B2PQ8NGI1 322 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 OR51L1Q8NGJ5 315 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 ELF4Q99607 663 aaPredicted RBP4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 MAP3K3Q99759 626 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 SORBS1Q9BX66 1292 aaKnown RBP4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 RBCK1Q9BYM8 510 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 FZD3Q9NPG1 666 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 LIN7CQ9NUP9 197 aaKnown RBP4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 C5AR2Q9P296 337 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 MTFP1Q9UDX5 166 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms