RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 SLC2A5P22732 501 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 HTR2CP28335 458 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 AQP1P29972 269 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 S100A5P33763 92 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 SHMT2P34897 504 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 RBMXP38159 391 aaKnown RBP1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 RFC3P40938 356 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 BTDP43251 543 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 HAAOP46952 286 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 DNASE1L1P49184 302 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 GPM6AP51674 278 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 UGT2B15P54855 530 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 MYL6P60660 151 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 UBE2MP61081 183 aaKnown RBP1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 ATP6V0D1P61421 351 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 RPS15AP62244 130 aaKnown RBP1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 VSNL1P62760 191 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 EGFEM1PQ0D2K5 195 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 DMC1Q14565 340 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 PSMD5Q16401 504 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 TRMT5Q32P41 509 aaKnown RBP1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 PARP15Q460N3 678 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 C5orf47Q569G3 176 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 GPRC6AQ5T6X5 926 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR2G6Q5TZ20 316 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 TIGD3Q6B0B8 471 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 ADNP2Q6IQ32 1131 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 ANKRD26P1Q6NSI1 321 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 TRIM40Q6P9F5 258 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 WDR74Q6RFH5 385 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 FAM151BQ6UXP7 276 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 TMIGD1Q6UXZ0 262 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZNF621Q6ZSS3 439 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 SSX6Q7RTT6 188 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 TGIF2LYQ8IUE0 185 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 NELFCDQ8IXH7 590 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 TMEM252Q8N6L7 170 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 NECAP1Q8NC96 275 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR2L5Q8NG80 312 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR6K6Q8NGW6 343 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR6K2Q8NGY2 324 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR5B3Q8NH48 314 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR56B4Q8NH76 319 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 LINC01006Q8NI28 216 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZNF502Q8TBZ5 544 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 ACOT11Q8WXI4 607 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 CDKL2Q92772 493 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 PAGE5Q96GU1 130 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 ITCHQ96J02 903 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 PGLYRP4Q96LB8 373 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 MS4A4EQ96PG1 132 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 ALS2CR12Q96Q35 445 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 SMIM14Q96QK8 99 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 CTRCQ99895 268 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 MRPL45Q9BRJ2 306 aaKnown RBP1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 UQCC2Q9BRT2 126 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 PELOQ9BRX2 385 aaKnown RBP1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 CCDC94Q9BW85 323 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 SRRQ9GZT4 340 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 DRC3Q9H069 523 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 ARMC7Q9H6L4 198 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 LRRC19Q9H756 370 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 PSTPIP2Q9H939 334 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 UCK1Q9HA47 277 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 PDFQ9HBH1 243 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 SLC38A10Q9HBR0 1119 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 NECAP2Q9NVZ3 263 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 MARCH5Q9NX47 278 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 DCDC2Q9UHG0 476 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 ING4Q9UNL4 249 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZNF256Q9Y2P7 627 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 GOLT1BQ9Y3E0 138 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 HYOU1Q9Y4L1 999 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 PUS1Q9Y606 427 aaKnown RBP eCLIP1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 UNC13AQ9UPW8 1703 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 ADCY9O60503 1353 aa1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 LRPPRCP42704 1394 aaKnown RBP1.71□□□□□ -2.14
HMGB1P35-201ENST00000503360 FANCIQ9NVI1 1328 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 IGHV1OR21-1A0A087WYE8 117 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 FAM231BA6NCW3 169 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 H3BN98 237 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 MKRN2OSH3BPM6 223 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 TOR1AO14656 332 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 MRPS12O15235 138 aaKnown RBP1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 COCHO43405 550 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 CLDN11O75508 207 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZMPSTE24O75844 475 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 LDOC1O95751 146 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 LSM8O95777 96 aaKnown RBP1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 CLIC3O95833 236 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 ACTL6AO96019 429 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 IGHV3-48P01763 117 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 IGHV2-5P01817 119 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 KLK3P07288 261 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 KRT7P08729 469 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 TACSTD2P09758 323 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 CT45A6P0DMU7 189 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 CT45A5P0DMU8 189 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 CT45A7P0DMV0 189 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 PGAM1P18669 254 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms