RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 BLVRAP53004 296 aa21.7■■□□□ 1.06
LSM6-202ENST00000502781 SNAPC1Q16533 368 aa21.7■■□□□ 1.06
LSM6-202ENST00000502781 TBC1D28Q2M2D7 210 aa21.7■■□□□ 1.06
LSM6-202ENST00000502781 PLBD1Q6P4A8 553 aa21.7■■□□□ 1.06
LSM6-202ENST00000502781 LYPD4Q6UWN0 246 aa21.7■■□□□ 1.06
LSM6-202ENST00000502781 VASH1Q7L8A9 365 aaPredicted RBP21.7■■□□□ 1.06
LSM6-202ENST00000502781 CPOQ8IVL8 374 aa21.7■■□□□ 1.06
LSM6-202ENST00000502781 PIGTQ969N2 578 aa21.7■■□□□ 1.06
LSM6-202ENST00000502781 PLEKHA8Q96JA3 519 aa21.7■■□□□ 1.06
LSM6-202ENST00000502781 ZNF442Q9H7R0 627 aa21.7■■□□□ 1.06
LSM6-202ENST00000502781 FAIMQ9NVQ4 179 aa21.7■■□□□ 1.06
LSM6-202ENST00000502781 COMMD3-BMI1R4GMX3 469 aa21.7■■□□□ 1.06
LSM6-202ENST00000502781 RER1O15258 196 aa21.69■■□□□ 1.06
LSM6-202ENST00000502781 CD8AP01732 235 aa21.69■■□□□ 1.06
LSM6-202ENST00000502781 HLA-DQA2P01906 255 aa21.69■■□□□ 1.06
LSM6-202ENST00000502781 CCL2P13500 99 aa21.69■■□□□ 1.06
LSM6-202ENST00000502781 ANPEPP15144 967 aa21.69■■□□□ 1.06
LSM6-202ENST00000502781 FMO3P31513 532 aa21.69■■□□□ 1.06
LSM6-202ENST00000502781 APOBEC3AP31941 199 aaPredicted RBP21.69■■□□□ 1.06
LSM6-202ENST00000502781 APLNRP35414 380 aa21.69■■□□□ 1.06
LSM6-202ENST00000502781 RCN1Q15293 331 aa21.69■■□□□ 1.06
LSM6-202ENST00000502781 PCK2Q16822 640 aa21.69■■□□□ 1.06
LSM6-202ENST00000502781 CCDC92Q53HC0 331 aaPredicted RBP21.69■■□□□ 1.06
LSM6-202ENST00000502781 OR10H5Q8NGA6 315 aa21.69■■□□□ 1.06
LSM6-202ENST00000502781 CCL19Q99731 98 aa21.69■■□□□ 1.06
LSM6-202ENST00000502781 TRAF4Q9BUZ4 470 aaPredicted RBP21.69■■□□□ 1.06
LSM6-202ENST00000502781 PRRG3Q9BZD7 231 aa21.69■■□□□ 1.06
LSM6-202ENST00000502781 ATPIF1Q9UII2 106 aa21.69■■□□□ 1.06
LSM6-202ENST00000502781 POLR1DQ9Y2S0 133 aa21.69■■□□□ 1.06
LSM6-202ENST00000502781 PRODHO43272 600 aa21.68■■□□□ 1.06
LSM6-202ENST00000502781 SYNGR3O43761 229 aa21.68■■□□□ 1.06
LSM6-202ENST00000502781 PRKYO43930 277 aa21.68■■□□□ 1.06
LSM6-202ENST00000502781 ICMTO60725 284 aa21.68■■□□□ 1.06
LSM6-202ENST00000502781 GLCEO94923 617 aa21.68■■□□□ 1.06
LSM6-202ENST00000502781 SLC2A5P22732 501 aa21.68■■□□□ 1.06
LSM6-202ENST00000502781 PCSK6P29122 969 aa21.68■■□□□ 1.06
LSM6-202ENST00000502781 ELF3P78545 371 aaPredicted RBP21.68■■□□□ 1.06
LSM6-202ENST00000502781 SNTB2Q13425 540 aaKnown RBP21.68■■□□□ 1.06
LSM6-202ENST00000502781 TEX30Q5JUR7 227 aa21.68■■□□□ 1.06
LSM6-202ENST00000502781 SLC18B1Q6NT16 456 aa21.68■■□□□ 1.06
LSM6-202ENST00000502781 ZBTB49Q6ZSB9 765 aa21.68■■□□□ 1.06
LSM6-202ENST00000502781 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.68■■□□□ 1.06
LSM6-202ENST00000502781 ZNF511Q8NB15 262 aa21.68■■□□□ 1.06
LSM6-202ENST00000502781 GJC3Q8NFK1 279 aa21.68■■□□□ 1.06
LSM6-202ENST00000502781 RIBC2Q9H4K1 309 aa21.68■■□□□ 1.06
LSM6-202ENST00000502781 MARCH7Q9H992 704 aa21.68■■□□□ 1.06
LSM6-202ENST00000502781 CDH20Q9HBT6 801 aa21.68■■□□□ 1.06
LSM6-202ENST00000502781 PLEK2Q9NYT0 353 aa21.68■■□□□ 1.06
LSM6-202ENST00000502781 LAMP3Q9UQV4 416 aa21.68■■□□□ 1.06
LSM6-202ENST00000502781 MYO9AB2RTY4 2548 aa21.67■■□□□ 1.06
LSM6-202ENST00000502781 OR6C6A6NF89 314 aa21.67■■□□□ 1.06
LSM6-202ENST00000502781 TVP23AA6NH52 213 aa21.67■■□□□ 1.06
LSM6-202ENST00000502781 OVOL3O00110 214 aa21.67■■□□□ 1.06
LSM6-202ENST00000502781 DOK2O60496 412 aa21.67■■□□□ 1.06
LSM6-202ENST00000502781 FABP6P51161 128 aa21.67■■□□□ 1.06
LSM6-202ENST00000502781 RAD23AP54725 363 aa21.67■■□□□ 1.06
LSM6-202ENST00000502781 RAB35Q15286 201 aa21.67■■□□□ 1.06
LSM6-202ENST00000502781 C11orf71Q6IPW1 123 aa21.67■■□□□ 1.06
LSM6-202ENST00000502781 KRT80Q6KB66 452 aa21.67■■□□□ 1.06
LSM6-202ENST00000502781 CORO6Q6QEF8 472 aa21.67■■□□□ 1.06
LSM6-202ENST00000502781 CXXC5Q7LFL8 322 aaKnown RBP21.67■■□□□ 1.06
LSM6-202ENST00000502781 MUC15Q8N387 334 aa21.67■■□□□ 1.06
LSM6-202ENST00000502781 TMEM171Q8WVE6 324 aa21.67■■□□□ 1.06
LSM6-202ENST00000502781 EME1Q96AY2 570 aa21.67■■□□□ 1.06
LSM6-202ENST00000502781 WDR76Q9H967 626 aa21.67■■□□□ 1.06
LSM6-202ENST00000502781 BEX4Q9NWD9 120 aaPredicted RBP21.67■■□□□ 1.06
LSM6-202ENST00000502781 NDRG4Q9ULP0 352 aaKnown RBP21.67■■□□□ 1.06
LSM6-202ENST00000502781 CREBBPQ92793 2442 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 PSKH1P11801 424 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 ZNF823P16415 610 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 THBS4P35443 961 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 GLRXP35754 106 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 GDI2P50395 445 aaKnown RBP21.66■■□□□ 1.06
LSM6-202ENST00000502781 ADAM8P78325 824 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 GALK2Q01415 458 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 ADIPOQQ15848 244 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 DEFB113Q30KQ7 82 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 AGAP6Q5VW22 663 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 FBXL14Q8N1E6 418 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 BBS1Q8NFJ9 593 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 OR6K6Q8NGW6 343 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 OTULINQ96BN8 352 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 OR51V1Q9H2C8 321 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 CBLN4Q9NTU7 201 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 GDF2Q9UK05 429 aaPredicted RBP21.66■■□□□ 1.06
LSM6-202ENST00000502781 SPEF1Q9Y4P9 236 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 ORC6Q9Y5N6 252 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 USF3Q68DE3 2245 aa21.66■■□□□ 1.06
LSM6-202ENST00000502781 C5orf49A4QMS7 147 aa21.65■■□□□ 1.06
LSM6-202ENST00000502781 GPRIN2O60269 458 aa21.65■■□□□ 1.06
LSM6-202ENST00000502781 WNT5AP41221 380 aa21.65■■□□□ 1.06
LSM6-202ENST00000502781 ENTPD1P49961 510 aa21.65■■□□□ 1.06
LSM6-202ENST00000502781 MST1LQ2TV78 715 aa21.65■■□□□ 1.06
LSM6-202ENST00000502781 SLC35D3Q5M8T2 416 aa21.65■■□□□ 1.06
LSM6-202ENST00000502781 LINC00346Q8IVM7 164 aa21.65■■□□□ 1.06
LSM6-202ENST00000502781 OR1F12Q8NHA8 337 aa21.65■■□□□ 1.06
LSM6-202ENST00000502781 TMEM163Q8TC26 289 aa21.65■■□□□ 1.06
LSM6-202ENST00000502781 HRASLS5Q96KN8 279 aa21.65■■□□□ 1.06
LSM6-202ENST00000502781 CDADC1Q9BWV3 514 aa21.65■■□□□ 1.06
LSM6-202ENST00000502781 HDHD2Q9H0R4 259 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms