RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 MEX3BQ6ZN04 569 aaKnown RBP11.83□□□□□ -0.52
CPNE1-227ENST00000498056 AHSA2Q719I0 299 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 SPATC1Q76KD6 591 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 CCDC36Q8IYA8 594 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 HSD17B8Q92506 261 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 BOD1Q96IK1 185 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 WFIKKN1Q96NZ8 548 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 OR2H1Q9GZK4 316 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 PLEK2Q9NYT0 353 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 NPAP1Q9NZP6 1156 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 CYB5R1Q9UHQ9 305 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 LAMP5Q9UJQ1 280 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 KLHDC2Q9Y2U9 406 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 ADGRG4Q8IZF6 3080 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 GCN1Q92616 2671 aaKnown RBP11.82□□□□□ -0.52
CPNE1-227ENST00000498056 IQCMA0A1B0GVH7 501 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 ZNF670-ZNF695F2Z2N8 137 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 DENRO43583 198 aaKnown RBP11.82□□□□□ -0.52
CPNE1-227ENST00000498056 CLDN1O95832 211 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 THBDP07204 575 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 LYNP07948 512 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 CELA3BP08861 270 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 HOXB1P14653 301 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-227ENST00000498056 PEX19P40855 299 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 KIR2DL3P43628 341 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 HCCSP53701 268 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 ACTC1P68032 377 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 ACTA1P68133 377 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 PLP2Q04941 152 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 RAB39AQ14964 217 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 RAB35Q15286 201 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 C6orf141Q5SZD1 244 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 C22orf34Q6ZV56 151 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 MYPOPQ86VE0 399 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-227ENST00000498056 CDC20BQ86Y33 519 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 GJC3Q8NFK1 279 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 OTOSQ8NHW6 89 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 LGALS12Q96DT0 336 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 MS4A3Q96HJ5 214 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 COPS4Q9BT78 406 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 YIPF3Q9GZM5 350 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 HDHD2Q9H0R4 259 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 WNT5BQ9H1J7 359 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 C1orf198Q9H425 327 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 HAO2Q9NYQ3 351 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 COPS3Q9UNS2 423 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 CADP27708 2225 aa11.82□□□□□ -0.52
CPNE1-227ENST00000498056 PKDREJQ9NTG1 2253 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 RTTNQ86VV8 2226 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 IRGMA1A4Y4 181 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 ZNF878C9JN71 531 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 APEX1P27695 318 aaKnown RBP11.81□□□□□ -0.52
CPNE1-227ENST00000498056 CXCR4P61073 352 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 PSG4Q00888 419 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 RAB40BQ12829 278 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 TEX30Q5JUR7 227 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 SEZ6L2Q6UXD5 910 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 VASH1Q7L8A9 365 aaPredicted RBP11.81□□□□□ -0.52
CPNE1-227ENST00000498056 SYT9Q86SS6 491 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 ZNF454Q8N9F8 522 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 ZNF540Q8NDQ6 660 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 OR52I1Q8NGK6 324 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 ST7LQ8TDW4 575 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 THEM6Q8WUY1 208 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 SLAMF6Q96DU3 332 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 MAP6Q96JE9 813 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 AMELYQ99218 206 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 ATF6BQ99941 703 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 KCNS3Q9BQ31 491 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 WACQ9BTA9 647 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 ABHD6Q9BV23 337 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 MOV10Q9HCE1 1003 aaKnown RBP11.81□□□□□ -0.52
CPNE1-227ENST00000498056 NGBQ9NPG2 151 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 CENPMQ9NSP4 180 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 SCN3BQ9NY72 215 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 B3GNT2Q9NY97 397 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 UBAP1Q9NZ09 502 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 CRIM1Q9NZV1 1036 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 IKZF2Q9UKS7 526 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 FBXL3Q9UKT7 428 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 TIMM10BQ9Y5J6 103 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 TMEM14AQ9Y6G1 99 aa11.81□□□□□ -0.52
CPNE1-227ENST00000498056 IGHV1-18A0A0C4DH31 117 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 EFCAB10A6NFE3 127 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 PSMD9O00233 223 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 PHYHO14832 338 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 CASKO14936 926 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 FADS2O95864 444 aaKnown RBP11.8□□□□□ -0.52
CPNE1-227ENST00000498056 IGKV3-15P01624 115 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 CECR9P0C854 216 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 CBR1P16152 277 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 ZNF14P17017 642 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-227ENST00000498056 IGFBP2P18065 325 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 CCNOP22674 350 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 HSD11B1P28845 292 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 APLNRP35414 380 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 TAF13Q15543 124 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 PCK2Q16822 640 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 TBC1D28Q2M2D7 210 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 KLHL22Q53GT1 634 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms