RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 PRMT8Q9NR22 394 aaPredicted RBP2.02□□□□□ -2.09
RIF1-212ENST00000498041 VAPAQ9P0L0 249 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 EPS15L1Q9UBC2 864 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 MIOXQ9UGB7 285 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 SLC7A8Q9UHI5 535 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 TRMT6Q9UJA5 497 aaKnown RBP2.02□□□□□ -2.09
RIF1-212ENST00000498041 KLHL21Q9UJP4 597 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 PLEKHA6Q9Y2H5 1048 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 IKBKGQ9Y6K9 419 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 PCLOQ9Y6V0 5065 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 FREM3P0C091 2139 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 BPTFQ12830 3046 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 TNRC6AQ8NDV7 1962 aaKnown RBP2.01□□□□□ -2.09
RIF1-212ENST00000498041 KMT2EQ8IZD2 1858 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 TRBV7-9A0A0J9YWB2 115 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 TRBV2A0A0J9YWF9 115 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 OR6C74A6NCV1 312 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 LRIT2A6NDA9 550 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 CLDN24A6NM45 220 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 GABRR3A8MPY1 467 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 B4DXG7 233 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 E5RI56 91 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 NPIPA2E9PIF3 369 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.01□□□□□ -2.09
RIF1-212ENST00000498041 GFYI3L273 518 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 M0R129 80 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 IMPA2O14732 288 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 AZIN1O14977 448 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 LSM1O15116 133 aaKnown RBP2.01□□□□□ -2.09
RIF1-212ENST00000498041 TM9SF1O15321 606 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 BIRC5O15392 142 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 NUDT21O43809 227 aaKnown RBP2.01□□□□□ -2.09
RIF1-212ENST00000498041 TPST1O60507 370 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 KERAO60938 352 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 SCN2BO60939 215 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 LRP3O75074 770 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 VPS26AO75436 327 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 TM7SF2O76062 418 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 APBB3O95704 486 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 BAG2O95816 211 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 EPPINO95925 133 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 PNPP00491 289 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 OPN1SWP03999 348 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 SERPIND1P05546 499 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 IVLP07476 585 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 CT62P0C5K7 136 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 ZNF7P17097 686 aaPredicted RBP2.01□□□□□ -2.09
RIF1-212ENST00000498041 IL1RNP18510 177 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 SDC1P18827 310 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 FUT1P19526 365 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 ME2P23368 584 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 RPS3P23396 243 aaKnown RBP eCLIP2.01□□□□□ -2.09
RIF1-212ENST00000498041 PTPN6P29350 595 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 CRABP2P29373 138 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 ALDH3B2P48448 385 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 CDK9P50750 372 aaKnown RBP2.01□□□□□ -2.09
RIF1-212ENST00000498041 P2RY4P51582 365 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 DNAJB13P59910 316 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 PSME3P61289 254 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 HERVK_113P63132 956 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 RPL38P63173 70 aaKnown RBP2.01□□□□□ -2.09
RIF1-212ENST00000498041 CSNK1G2P78368 415 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 BTG2P78543 158 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 SARNPP82979 210 aaKnown RBP2.01□□□□□ -2.09
RIF1-212ENST00000498041 HOXC5Q00444 222 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 ZNF33AQ06730 810 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 EIF2B1Q14232 305 aaKnown RBP2.01□□□□□ -2.09
RIF1-212ENST00000498041 PDGFRLQ15198 375 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 TRIP10Q15642 601 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 DEFB133Q30KQ1 61 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 NDUFAF6Q330K2 333 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 LRIT3Q3SXY7 679 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 C1QTNF12Q5T7M4 302 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 FAM92BQ6ZTR7 304 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 YRDCQ86U90 279 aaKnown RBP2.01□□□□□ -2.09
RIF1-212ENST00000498041 TRAPPC5Q8IUR0 188 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 WDFY1Q8IWB7 410 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 PRSS58Q8IYP2 241 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 LEMD2Q8NC56 503 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 OR4F17Q8NGA8 305 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 OR52E1Q8NGJ3 308 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 OR10G6Q8NH81 332 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 CXorf40AQ8TE69 158 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.01□□□□□ -2.098e-7■■■■■ 32.1
RIF1-212ENST00000498041 CDKL2Q92772 493 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 RAB8BQ92930 207 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 MAL2Q969L2 176 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 ISG20Q96AZ6 181 aaKnown RBP2.01□□□□□ -2.09
RIF1-212ENST00000498041 TM4SF18Q96CE8 201 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 CCDC124Q96CT7 223 aaKnown RBP2.01□□□□□ -2.09
RIF1-212ENST00000498041 TUBGCP3Q96CW5 907 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 LRRC39Q96DD0 335 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 FAM122AQ96E09 287 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 L3HYPDHQ96EM0 354 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 C12orf66Q96MD2 445 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 OR4F4Q96R69 305 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 LYSMD1Q96S90 227 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 COPS8Q99627 209 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 KIR2DL4Q99706 377 aa2.01□□□□□ -2.09
RIF1-212ENST00000498041 CTRCQ99895 268 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms