RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 PITPNAQ00169 270 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 KDSRQ06136 332 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 MADCAM1Q13477 382 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 KCNJ11Q14654 390 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 MAD2L1BPQ15013 274 aaPredicted RBP4.96□□□□□ -1.62
BRCA1-224ENST00000497488 COQ5Q5HYK3 327 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 VAX1Q5SQQ9 334 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 PCSK4Q6UW60 755 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 FRRS1Q6ZNA5 592 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 FOXL2NBQ6ZUU3 175 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 ABHD12Q8N2K0 398 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 RAB42Q8N4Z0 105 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 OR52B6Q8NGF0 335 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 CXorf40AQ8TE69 158 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 PRAC1Q96KF2 57 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 HSD17B14Q9BPX1 270 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 BEX2Q9BXY8 128 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 DGCR6LQ9BY27 220 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 TMEM38AQ9H6F2 299 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 CAB39LQ9H9S4 337 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.96□□□□□ -1.62
BRCA1-224ENST00000497488 GIN1Q9NXP7 522 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 PPP1R3CQ9UQK1 317 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 RIC1Q4ADV7 1423 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 SMCHD1A6NHR9 2005 aa4.96□□□□□ -1.62
BRCA1-224ENST00000497488 CHD4Q14839 1912 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 SLX4Q8IY92 1834 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 CACNA1SQ13698 1873 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 IGLV3-22A0A075B6J6 115 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 A0A0A6YYD5 115 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 GLYATL1P3A0A0U1RQE8 302 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 GOLGA8IPA6NC78 632 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 TRABD2BA6NFA1 517 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 ZNF705EA8MWA4 302 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-224ENST00000497488 SGCEO43556 437 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 MAGEC1O60732 1142 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 SCRG1O75711 98 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 SERPINA6P08185 405 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 KRT7P08729 469 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 SNRPCP09234 159 aaKnown RBP4.95□□□□□ -1.62
BRCA1-224ENST00000497488 CDK4P11802 303 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 EPHX2P34913 555 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 HILS1P60008 231 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 COL10A1Q03692 680 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 PSMD5Q16401 504 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 SSX6Q7RTT6 188 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 ZNF575Q86XF7 245 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 PLA2G4DQ86XP0 818 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 TMEM25Q86YD3 366 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 ZNF740Q8NDX6 193 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 MDS2Q8NDY4 140 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 VN1R2Q8NFZ6 395 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 OR5T1Q8NG75 326 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 OR2Y1Q8NGV0 311 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 OR6K6Q8NGW6 343 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 PAGE5Q96GU1 130 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 POM121L2Q96KW2 1035 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 C9orf85Q96MD7 179 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 OR5B12Q96R08 314 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 HCAR1Q9BXC0 346 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 MMP28Q9H239 520 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 PLEKHA1Q9HB21 404 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 RARRES3Q9UL19 164 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 ING4Q9UNL4 249 aa4.95□□□□□ -1.62
BRCA1-224ENST00000497488 LAMB2P55268 1798 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 COL4A5P29400 1685 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 TVP23AA6NH52 213 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 GOLGA6L10A6NI86 522 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 hCG_2039718K7EN88 272 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 K7EQG2 157 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 RCBTB2O95199 551 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 GJB5O95377 273 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 TNFAIP8O95379 198 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 CATP04040 527 aaKnown RBP4.94□□□□□ -1.62
BRCA1-224ENST00000497488 IGKV5-2P06315 115 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 MAGP20916 626 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 MARK3P27448 753 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 PDHA2P29803 388 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 ARR3P36575 388 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 RBM34P42696 430 aaKnown RBP4.94□□□□□ -1.62
BRCA1-224ENST00000497488 RANBP1P43487 201 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 OR1D4P47884 311 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 XKP51811 444 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 STXBP1P61764 594 aaKnown RBP4.94□□□□□ -1.62
BRCA1-224ENST00000497488 B2MP61769 119 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 SP4Q02446 784 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 TPBGQ13641 420 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 FHL2Q14192 279 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 TWIST1Q15672 202 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 TMEM31Q5JXX7 168 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 FFAR4Q5NUL3 377 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 KHDRBS2Q5VWX1 349 aaKnown RBP4.94□□□□□ -1.62
BRCA1-224ENST00000497488 DUPD1Q68J44 220 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 LHFPL3Q86UP9 236 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 FUNDC1Q8IVP5 155 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 MREGQ8N565 214 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 ZNF738Q8NE65 137 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 SPATA3Q8NHX4 192 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-224ENST00000497488 FGF11Q92914 225 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms