RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 FRA10AC1Q70Z53 315 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 UTS2BQ765I0 119 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 MRPL21Q7Z2W9 205 aaKnown RBP3.65□□□□□ -1.83
SF3B1-212ENST00000496458 SLC51BQ86UW2 128 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 ENTHD1Q8IYW4 607 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 TMEM104Q8NE00 496 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 FBXL13Q8NEE6 735 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 CEP19Q96LK0 163 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 EBF4Q9BQW3 602 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 PSTPIP2Q9H939 334 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 CCNB1IP1Q9NPC3 277 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 SLC17A5Q9NRA2 495 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 SAMSN1Q9NSI8 373 aaKnown RBP3.65□□□□□ -1.83
SF3B1-212ENST00000496458 DUS2Q9NX74 493 aaKnown RBP3.65□□□□□ -1.83
SF3B1-212ENST00000496458 CYTH4Q9UIA0 394 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 ENPP5Q9UJA9 477 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 CFL2Q9Y281 166 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 RBMX2Q9Y388 322 aaKnown RBP3.65□□□□□ -1.83
SF3B1-212ENST00000496458 MAD1L1Q9Y6D9 718 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 CASZ1Q86V15 1759 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 FRMPD4Q14CM0 1322 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 ZNF831Q5JPB2 1677 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 QSER1Q2KHR3 1735 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 KDM3BQ7LBC6 1761 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 KBTBD11-OT1A0A1B0GTJ5 212 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 TMEM120BA0PK00 339 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 CCDC182A6NF36 153 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 SMCO2A6NFE2 343 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 TRPC5OSA6NMA1 111 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 CENPBD1B2RD01 187 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 CASKO14936 926 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 RAMP3O60896 148 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 NDUFS6O75380 124 aaKnown RBP3.64□□□□□ -1.83
SF3B1-212ENST00000496458 SERPINB7O75635 380 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 LRATO95237 230 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 TMEM50AO95807 157 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 DCNP07585 359 aaKnown RBP3.64□□□□□ -1.83
SF3B1-212ENST00000496458 CT62P0C5K7 136 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 UBCP0CG48 685 aaKnown RBP3.64□□□□□ -1.83
SF3B1-212ENST00000496458 CTRB1P17538 263 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 IMPDH1P20839 514 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 PRDX3P30048 256 aaKnown RBP3.64□□□□□ -1.83
SF3B1-212ENST00000496458 HOXA6P31267 233 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 HSPA9P38646 679 aaKnown RBP3.64□□□□□ -1.83
SF3B1-212ENST00000496458 CAV2P51636 162 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 RAB10P61026 200 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 NTHL1P78549 312 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 HPCAP84074 193 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 OC90Q02509 493 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-212ENST00000496458 KLRB1Q12918 225 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 PSG3Q16557 428 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 CYP51A1Q16850 503 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 C6orf183Q5T699 404 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 CTRB2Q6GPI1 263 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 OR52W1Q6IF63 320 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 ASCL4Q6XD76 172 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 TPGS1Q6ZTW0 290 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 MKXQ8IYA7 352 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 C8orf31Q8N9H6 132 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 FBXO36Q8NEA4 188 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 OR7G1Q8NGA0 311 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 MAGEE2Q8TD90 523 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-212ENST00000496458 OLFM3Q96PB7 478 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 OPALINQ96PE5 141 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 FMO2Q99518 471 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 TMEM246Q9BRR3 403 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 CNPY3Q9BT09 278 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 HINT2Q9BX68 163 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 NDEL1Q9GZM8 345 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 PTGES2Q9H7Z7 377 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 DDX19AQ9NUU7 478 aaKnown RBP3.64□□□□□ -1.83
SF3B1-212ENST00000496458 ARMC1Q9NVT9 282 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 RHBDL2Q9NX52 303 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 SIGLEC8Q9NYZ4 499 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 IL36GQ9NZH8 169 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 ADA2Q9NZK5 511 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 UXTQ9UBK9 157 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-212ENST00000496458 CLN8Q9UBY8 286 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 FLVCR2Q9UPI3 526 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 NEU3Q9UQ49 428 aa3.64□□□□□ -1.83
SF3B1-212ENST00000496458 COL4A4P53420 1690 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-212ENST00000496458 USP42Q9H9J4 1324 aaKnown RBP3.64□□□□□ -1.83
SF3B1-212ENST00000496458 NUP98P52948 1817 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 RAB19A4D1S5 217 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 OR5K4A6NMS3 321 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 SYCE1LA8MT33 242 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 A8MUA0 341 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 A8MXQ7 604 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 TMEM114B3SHH9 223 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 GOLGA8MH3BSY2 632 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 MSH4O15457 936 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 EFNA2O43921 213 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 SCN2BO60939 215 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 OXSR1O95747 527 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-212ENST00000496458 ALOX5P09917 674 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 NQO2P16083 231 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 ZNF43P17038 809 aa3.63□□□□□ -1.83
SF3B1-212ENST00000496458 XRCC1P18887 633 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-212ENST00000496458 RBMXP38159 391 aaKnown RBP3.63□□□□□ -1.83
SF3B1-212ENST00000496458 TUFMP49411 452 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms