RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 FUT5Q11128 374 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 CRMP1Q14194 572 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 ELOCQ15369 112 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 TOMM34Q15785 309 aaPredicted RBP8.2□□□□□ -1.1
HPS4-217ENST00000496385 UBE2V2Q15819 145 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 KHDC3LQ587J8 217 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 OR2A2Q6IF42 318 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 ARHGAP11AQ6P4F7 1023 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 CRTC1Q6UUV9 634 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 SLC35F2Q8IXU6 374 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 GPR137CQ8N3F9 429 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 OR10AD1Q8NGE0 317 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 OR56A1Q8NGH5 318 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 HPSE2Q8WWQ2 592 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 TGM7Q96PF1 710 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 PRO1933Q9H354 126 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 NCOR1P1Q9H4R4 102 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 SYNPO2LQ9H987 977 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 ADAM29Q9UKF5 820 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 TRAV18A0A075B6X5 111 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 TMEM269A0A1B0GVZ9 245 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 SMCO3A2RU48 225 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 CCSO14618 274 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 DLEU1O43261 78 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 CST4P01036 141 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 GAPDHP04406 335 aaKnown RBP8.2□□□□□ -1.1
HPS4-217ENST00000496385 NR2C1P13056 603 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 GABRR1P24046 479 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 SLC10A1Q14973 349 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 NR0B2Q15466 257 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 TGIF1Q15583 401 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 C14orf28Q4W4Y0 310 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 STPG1Q5TH74 334 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 ZNF385CQ66K41 422 aaPredicted RBP8.2□□□□□ -1.1
HPS4-217ENST00000496385 ZSCAN4Q8NAM6 433 aaPredicted RBP8.2□□□□□ -1.1
HPS4-217ENST00000496385 OR6K2Q8NGY2 324 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 GAL3ST3Q96A11 431 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 TMEM159Q96B96 161 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 OPN3Q9H1Y3 402 aaPredicted RBP8.2□□□□□ -1.1
HPS4-217ENST00000496385 TAF9BQ9HBM6 251 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 SPACA1Q9HBV2 294 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 GNG8Q9UK08 70 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 ATG4BQ9Y4P1 393 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 MMACHCQ9Y4U1 282 aa8.2□□□□□ -1.1
HPS4-217ENST00000496385 TRBV5-5A0A0J9YX44 114 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 OTOL1A6NHN0 477 aaPredicted RBP8.19□□□□□ -1.1
HPS4-217ENST00000496385 APBB3O95704 486 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 CYB5AP00167 134 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 KLKB1P03952 638 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 THY1P04216 161 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 DCNP07585 359 aaKnown RBP8.19□□□□□ -1.1
HPS4-217ENST00000496385 TMIGD3P0DMS9 266 aaPredicted RBP8.19□□□□□ -1.1
HPS4-217ENST00000496385 ZNF84P51523 738 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 TAS2R31P59538 309 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 RPS23P62266 143 aaKnown RBP8.19□□□□□ -1.1
HPS4-217ENST00000496385 FAM3AP98173 230 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 AKR1C8PQ5T2L2 129 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 ZNF529Q6P280 563 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 BIVMQ86UB2 503 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 MMP21Q8N119 569 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 OR13C8Q8NGS7 320 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 MR1Q95460 341 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 PLD4Q96BZ4 506 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 MUCL1Q96DR8 90 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 PRAP1Q96NZ9 151 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 CCNL2Q96S94 520 aaPredicted RBP8.19□□□□□ -1.1
HPS4-217ENST00000496385 PBDC1Q9BVG4 233 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 SLC5A7Q9GZV3 580 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 SLC35B3Q9H1N7 401 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 SMOC1Q9H4F8 434 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 KCNJ16Q9NPI9 418 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 PRODH2Q9UF12 536 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 SERTAD3Q9UJW9 196 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 C9J4A7 227 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 UMAD1C9J7I0 102 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 M0R143 59 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 DCTN6O00399 190 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 HIST1H2BKO60814 126 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 LRP3O75074 770 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 TSPAN15O95858 294 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 ARG1P05089 322 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 HIST1H2BJP06899 126 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 TACSTD2P09758 323 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 ADRA2CP18825 462 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 HIST1H2BOP23527 126 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 IL2RGP31785 369 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 HIST1H2BBP33778 126 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 ARRB1P49407 418 aaPredicted RBP8.19□□□□□ -1.1
HPS4-217ENST00000496385 HIST1H2BDP58876 126 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 TBPL1P62380 186 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 HIST1H2BCP62807 126 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 RAC1P63000 192 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 CLINT1Q14677 625 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 GUK1Q16774 197 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 HIST2H2BEQ16778 126 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.19□□□□□ -1.1
HPS4-217ENST00000496385 TMPRSS12Q86WS5 348 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 VRK2Q86Y07 508 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 OR8S1Q8NH09 359 aa8.19□□□□□ -1.1
HPS4-217ENST00000496385 OR5AK2Q8NH90 309 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms