RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 ELFN2Q5R3F8 820 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 THEM4Q5T1C6 240 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 SHQ1Q6PI26 577 aaKnown RBP12.34□□□□□ -0.43
CXCL12-208ENST00000496375 SLC25A47Q6Q0C1 308 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 ZNF584Q8IVC4 421 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 SKA3Q8IX90 412 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 FGFBP3Q8TAT2 258 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 Q96M85 177 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 ZNF570Q96NI8 536 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 MS4A5Q9H3V2 200 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 TMEM38BQ9NVV0 291 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 VSX1Q9NZR4 365 aaPredicted RBP12.34□□□□□ -0.43
CXCL12-208ENST00000496375 GRHPRQ9UBQ7 328 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 TMEFF2Q9UIK5 374 aaPredicted RBP12.34□□□□□ -0.43
CXCL12-208ENST00000496375 FBXL3Q9UKT7 428 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 UGT2A1Q9Y4X1 527 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 SLC22A23A1A5C7 686 aa12.33□□□□□ -0.44
CXCL12-208ENST00000496375 PRSS37A4D1T9 235 aa12.33□□□□□ -0.44
CXCL12-208ENST00000496375 BHLHE40O14503 412 aa12.33□□□□□ -0.44
CXCL12-208ENST00000496375 GNGT2O14610 69 aa12.33□□□□□ -0.44
CXCL12-208ENST00000496375 HPXP02790 462 aa12.33□□□□□ -0.44
CXCL12-208ENST00000496375 SERPINA5P05154 406 aa12.33□□□□□ -0.44
CXCL12-208ENST00000496375 ERFP50548 548 aa12.33□□□□□ -0.44
CXCL12-208ENST00000496375 MRPS34P82930 218 aaKnown RBP12.33□□□□□ -0.44
CXCL12-208ENST00000496375 TOP3AQ13472 1001 aaPredicted RBP12.33□□□□□ -0.44
CXCL12-208ENST00000496375 KRR1Q13601 381 aaKnown RBP12.33□□□□□ -0.44
CXCL12-208ENST00000496375 UGT2A3Q6UWM9 527 aa12.33□□□□□ -0.44
CXCL12-208ENST00000496375 SLC22A24Q8N4F4 322 aa12.33□□□□□ -0.44
CXCL12-208ENST00000496375 SYT14Q8NB59 555 aa12.33□□□□□ -0.44
CXCL12-208ENST00000496375 DNAJC9Q8WXX5 260 aa12.33□□□□□ -0.44
CXCL12-208ENST00000496375 C1orf159Q96HA4 380 aa12.33□□□□□ -0.44
CXCL12-208ENST00000496375 FEVQ99581 238 aa12.33□□□□□ -0.44
CXCL12-208ENST00000496375 SH3GL3Q99963 347 aa12.33□□□□□ -0.44
CXCL12-208ENST00000496375 DUSP13Q9UII6 198 aa12.33□□□□□ -0.44
CXCL12-208ENST00000496375 IGKV1D-43A0A0B4J1Z2 117 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 TEX13CA0A0J9YWL9 993 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 A0A1W2PPW3 197 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 XKRYO14609 159 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 ATP6V1G2O95670 118 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 OR8G3PP0DMU2 310 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 ANXA8P13928 327 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 COL8A2P25067 703 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 FASP25445 335 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 SRP14P37108 136 aaKnown RBP12.32□□□□□ -0.44
CXCL12-208ENST00000496375 GPR6P46095 362 aaPredicted RBP12.32□□□□□ -0.44
CXCL12-208ENST00000496375 ZNF84P51523 738 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 FMODQ06828 376 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 CD47Q08722 323 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 KPNB1Q14974 876 aaKnown RBP12.32□□□□□ -0.44
CXCL12-208ENST00000496375 LIPNQ5VXI9 398 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 ZFP1Q6P2D0 407 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 FAHD1Q6P587 224 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 DPPA2Q7Z7J5 298 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 LNX2Q8N448 690 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 RFLNBQ8N5W9 214 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 OR8D4Q8NGM9 314 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 OR5K1Q8NHB7 308 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 RDH5Q92781 318 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 NABP1Q96AH0 204 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 RASD2Q96D21 266 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 SAMD8Q96LT4 415 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 RBP7Q96R05 134 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 NIPSNAP1Q9BPW8 284 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 PLA2G12AQ9BZM1 189 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 GABARAPL1Q9H0R8 117 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 EGLN3Q9H6Z9 239 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 PDP1Q9P0J1 537 aaPredicted RBP12.32□□□□□ -0.44
CXCL12-208ENST00000496375 IL20RAQ9UHF4 553 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 IER3IP1Q9Y5U9 82 aa12.32□□□□□ -0.44
CXCL12-208ENST00000496375 H3BNX3 289 aa12.31□□□□□ -0.44
CXCL12-208ENST00000496375 TCF21O43680 179 aa12.31□□□□□ -0.44
CXCL12-208ENST00000496375 E2F6O75461 281 aa12.31□□□□□ -0.44
CXCL12-208ENST00000496375 FARS2O95363 451 aaKnown RBP12.31□□□□□ -0.44
CXCL12-208ENST00000496375 SLC2A10O95528 541 aa12.31□□□□□ -0.44
CXCL12-208ENST00000496375 PPP1R3DO95685 299 aa12.31□□□□□ -0.44
CXCL12-208ENST00000496375 NAT2P11245 290 aa12.31□□□□□ -0.44
CXCL12-208ENST00000496375 ACHEP22303 614 aa12.31□□□□□ -0.44
CXCL12-208ENST00000496375 DVL1P1P54792 670 aaPredicted RBP12.31□□□□□ -0.44
CXCL12-208ENST00000496375 MYBPC1Q00872 1141 aa12.31□□□□□ -0.44
CXCL12-208ENST00000496375 ALKBH6Q3KRA9 238 aa12.31□□□□□ -0.44
CXCL12-208ENST00000496375 RGS7BPQ6MZT1 257 aaPredicted RBP12.31□□□□□ -0.44
CXCL12-208ENST00000496375 PTCHD4Q6ZW05 846 aa12.31□□□□□ -0.44
CXCL12-208ENST00000496375 SLC30A7Q8NEW0 376 aa12.31□□□□□ -0.44
CXCL12-208ENST00000496375 OR52L1Q8NGH7 329 aa12.31□□□□□ -0.44
CXCL12-208ENST00000496375 CLDND2Q8NHS1 167 aa12.31□□□□□ -0.44
CXCL12-208ENST00000496375 ERMAPQ96PL5 475 aaPredicted RBP12.31□□□□□ -0.44
CXCL12-208ENST00000496375 DDOQ99489 341 aa12.31□□□□□ -0.44
CXCL12-208ENST00000496375 NARFLQ9H6Q4 476 aa12.31□□□□□ -0.44
CXCL12-208ENST00000496375 RNF121Q9H920 327 aa12.31□□□□□ -0.44
CXCL12-208ENST00000496375 BAIAP2Q9UQB8 552 aa12.31□□□□□ -0.44
CXCL12-208ENST00000496375 B4DSR2 109 aa12.3□□□□□ -0.44
CXCL12-208ENST00000496375 NCR1O76036 304 aa12.3□□□□□ -0.44
CXCL12-208ENST00000496375 FAM157BP0CG42 384 aa12.3□□□□□ -0.44
CXCL12-208ENST00000496375 CCL2P13500 99 aa12.3□□□□□ -0.44
CXCL12-208ENST00000496375 PCMT1P22061 227 aa12.3□□□□□ -0.44
CXCL12-208ENST00000496375 CDKN2AP42771 156 aaKnown RBP12.3□□□□□ -0.44
CXCL12-208ENST00000496375 ARHGDIAP52565 204 aa12.3□□□□□ -0.44
CXCL12-208ENST00000496375 NKPD1Q17RQ9 610 aa12.3□□□□□ -0.44
CXCL12-208ENST00000496375 ZNF362Q5T0B9 420 aaPredicted RBP12.3□□□□□ -0.44
CXCL12-208ENST00000496375 TMEM53Q6P2H8 277 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms