RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 DNAJC8O75937 253 aaPredicted RBP15.13■□□□□ 0.01
HDAC4-211ENST00000494800 ABHD16AO95870 558 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 CST1P01037 141 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 HIST1H1CP16403 213 aaKnown RBP15.13■□□□□ 0.01
HDAC4-211ENST00000494800 HOXB4P17483 251 aaPredicted RBP15.13■□□□□ 0.01
HDAC4-211ENST00000494800 RASSF2P50749 326 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 ERVS71-1P61550 626 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 FLOT2Q14254 428 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 MAD2L1BPQ15013 274 aaPredicted RBP15.13■□□□□ 0.01
HDAC4-211ENST00000494800 KCNMB1Q16558 191 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 TMEM249Q2WGJ8 235 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 PCGF3Q3KNV8 242 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 CLEC12AQ5QGZ9 265 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 RASSF6Q6ZTQ3 369 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 C4orf45Q96LM5 186 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 CHID1Q9BWS9 393 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 RACGAP1Q9H0H5 632 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 EGLN3Q9H6Z9 239 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 SRA1Q9HD15 236 aaKnown RBP15.13■□□□□ 0.01
HDAC4-211ENST00000494800 HINT3Q9NQE9 182 aaKnown RBP15.13■□□□□ 0.01
HDAC4-211ENST00000494800 RPRD1BQ9NQG5 326 aaKnown RBP15.13■□□□□ 0.01
HDAC4-211ENST00000494800 TBC1D23Q9NUY8 699 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 MYEF2Q9P2K5 600 aaKnown RBP15.13■□□□□ 0.01
HDAC4-211ENST00000494800 C2CD3Q4AC94 2353 aa15.13■□□□□ 0.01
HDAC4-211ENST00000494800 A0A096LNT2 108 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 PLSCR5A0PG75 271 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 VWC2LB2RUY7 222 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 INAFM1C9JVW0 142 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 ICMTO60725 284 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 CLPTM1O96005 669 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 GASTP01350 101 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 SCG5P05408 212 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 NAT2P11245 290 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 TUBG1P23258 451 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 WNT5AP41221 380 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 ALKBH6Q3KRA9 238 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 SLC36A3Q495N2 470 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 SPATA24Q86W54 205 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 ZNF101Q8IZC7 436 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 NPEPL1Q8NDH3 523 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 GJC3Q8NFK1 279 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 OR52E2Q8NGJ4 325 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 COG8Q96MW5 612 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 CDADC1Q9BWV3 514 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 YAE1D1Q9NRH1 226 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 TUBG2Q9NRH3 451 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 CYSLTR2Q9NS75 346 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 IL20Q9NYY1 176 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 B9D1Q9UPM9 204 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 BAIAP2Q9UQB8 552 aa15.12■□□□□ 0.01
HDAC4-211ENST00000494800 C17orf100A8MU93 164 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 MPZL1O95297 269 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 IGHV3-13P01766 116 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 HLA-DQA2P01906 255 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 GIFP27352 417 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 LIPAP38571 399 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 GZMKP49863 264 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 PPP1CBP62140 327 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 KRTAP1-1Q07627 177 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.11■□□□□ 0.01
HDAC4-211ENST00000494800 PPP1R8Q12972 351 aaKnown RBP15.11■□□□□ 0.01
HDAC4-211ENST00000494800 ZMAT1Q5H9K5 638 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 SPATA46Q5T0L3 261 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 SLC35F1Q5T1Q4 408 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 MBNL2Q5VZF2 373 aaKnown RBP15.11■□□□□ 0.01
HDAC4-211ENST00000494800 CYB5R2Q6BCY4 276 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 ZNF770Q6IQ21 691 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-211ENST00000494800 VASH1Q7L8A9 365 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-211ENST00000494800 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-211ENST00000494800 ADGRG5Q8IZF4 528 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 OR6V1Q8N148 313 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 SDR9C7Q8NEX9 313 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 OR10G2Q8NGC3 310 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 SLC25A40Q8TBP6 338 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 RDH5Q92781 318 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 TSSK2Q96PF2 358 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 DGCR6LQ9BY27 220 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 BPESC1Q9GZL8 116 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 TBCCD1Q9NVR7 557 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 CGGBP1Q9UFW8 167 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-211ENST00000494800 ATPIF1Q9UII2 106 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 ARFGEF3Q5TH69 2177 aa15.11■□□□□ 0.01
HDAC4-211ENST00000494800 ZFHX3Q15911 3703 aa15.1■□□□□ 0.01
HDAC4-211ENST00000494800 IGLV1-36A0A0B4J1U3 117 aa15.1■□□□□ 0.01
HDAC4-211ENST00000494800 TPD52L2O43399 206 aaKnown RBP15.1■□□□□ 0.01
HDAC4-211ENST00000494800 ATP5HO75947 161 aa15.1■□□□□ 0.01
HDAC4-211ENST00000494800 IGFBP1P08833 259 aaPredicted RBP15.1■□□□□ 0.01
HDAC4-211ENST00000494800 CHN2P52757 468 aa15.1■□□□□ 0.01
HDAC4-211ENST00000494800 MRPS11P82912 194 aaKnown RBP15.1■□□□□ 0.01
HDAC4-211ENST00000494800 COX10Q12887 443 aa15.1■□□□□ 0.01
HDAC4-211ENST00000494800 RFPL4BQ6ZWI9 263 aa15.1■□□□□ 0.01
HDAC4-211ENST00000494800 ZBTB46Q86UZ6 589 aa15.1■□□□□ 0.01
HDAC4-211ENST00000494800 OR2T33Q8NG76 320 aa15.1■□□□□ 0.01
HDAC4-211ENST00000494800 OR2AJ1Q8NGZ0 328 aa15.1■□□□□ 0.01
HDAC4-211ENST00000494800 OR2T4Q8NH00 348 aa15.1■□□□□ 0.01
HDAC4-211ENST00000494800 OR1F12Q8NHA8 337 aa15.1■□□□□ 0.01
HDAC4-211ENST00000494800 KLF14Q8TD94 323 aaPredicted RBP15.1■□□□□ 0.01
HDAC4-211ENST00000494800 GIPC3Q8TF64 312 aa15.1■□□□□ 0.01
HDAC4-211ENST00000494800 CANT1Q8WVQ1 401 aa15.1■□□□□ 0.01
HDAC4-211ENST00000494800 IPCEF1Q8WWN9 437 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms