RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 IGHV1-18A0A0C4DH31 117 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 DUXAA6NLW8 204 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 VCYO14598 125 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 ANKRD28O15084 1053 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 SCN2BO60939 215 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 CRYAAP02489 173 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 SHBGP04278 402 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 KRT16P08779 473 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 ADRA2AP08913 450 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 G6PDP11413 515 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 NEFHP12036 1026 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 MMP9P14780 707 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 ARSBP15848 533 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 TCN1P20061 433 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-219ENST00000494323 TNFRSF1BP20333 461 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 PRPS1L1P21108 318 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 MYF6P23409 242 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 COL8A2P25067 703 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 ALDH3A1P30838 453 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 CALCRP30988 508 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 RPL3P39023 403 aaKnown RBP4.42□□□□□ -1.7
PTCD3-219ENST00000494323 CLK1P49759 484 aaKnown RBP4.42□□□□□ -1.7
PTCD3-219ENST00000494323 ENTPD1P49961 510 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 ZP1P60852 638 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 SLC35A1P78382 337 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 KCNJ10P78508 379 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 MRPS34P82930 218 aaKnown RBP4.42□□□□□ -1.7
PTCD3-219ENST00000494323 BNIP2Q12982 314 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 CEACAM7Q14002 265 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 SLC17A1Q14916 467 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 OR7A5Q15622 319 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 ZSWIM7Q19AV6 140 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 WHAMMP3Q1A5X7 153 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 FAM174BQ3ZCQ3 159 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 MMEL1Q495T6 779 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 GPAT3Q53EU6 434 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 OTUD3Q5T2D3 398 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-219ENST00000494323 DCAF12L2Q5VW00 463 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 TMEM225Q6GV28 225 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 TYW3Q6IPR3 259 aaKnown RBP4.42□□□□□ -1.7
PTCD3-219ENST00000494323 TNFAIP8L2Q6P589 184 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-219ENST00000494323 EMBQ6PCB8 327 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 BHLHB9Q6PI77 547 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 GRINAQ7Z429 371 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 ANKRD46Q86W74 232 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 CARM1Q86X55 608 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 RIMKLAQ8IXN7 391 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 IFT20Q8IY31 132 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 KDM8Q8N371 416 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 SVOPLQ8N434 492 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 RFLNBQ8N5W9 214 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 ARFGAP2Q8N6H7 521 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 FNDC5Q8NAU1 212 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 SFXN5Q8TD22 340 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 BCL2L2Q92843 193 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-219ENST00000494323 MOAP1Q96BY2 351 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 ROPN1LQ96C74 230 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 TUBGCP3Q96CW5 907 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 DDIT4LQ96D03 193 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 PPP1R36Q96LQ0 422 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 PPP3R2Q96LZ3 170 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 C16orf45Q96MC5 204 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-219ENST00000494323 SLC38A2Q96QD8 506 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 DOK1Q99704 481 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 KCNS3Q9BQ31 491 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 RHOXF2Q9BQY4 288 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 NAA11Q9BSU3 229 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-219ENST00000494323 ZNF350Q9GZX5 532 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 RAB1BQ9H0U4 201 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 NARFLQ9H6Q4 476 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 METTL17Q9H7H0 456 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-219ENST00000494323 LPAR2Q9HBW0 351 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 EXD2Q9NVH0 621 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 ATAD3AQ9NVI7 634 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 ZDHHC2Q9UIJ5 367 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 OSGIN1Q9UJX0 560 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 SLC9A8Q9Y2E8 581 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 TMED7Q9Y3B3 224 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 SPIN1Q9Y657 262 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-219ENST00000494323 TGP01266 2768 aa4.42□□□□□ -1.7
PTCD3-219ENST00000494323 RNF103-CHMP3A0A140T963 221 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 TMEM129A0AVI4 362 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 OR6C65A6NJZ3 312 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 MS4A18H0YCH9 400 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 hCG_2039718K7EN88 272 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 WNT9BO14905 357 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 OGG1O15527 345 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 EIF1BO60739 113 aaKnown RBP4.41□□□□□ -1.7
PTCD3-219ENST00000494323 LYPLA1O75608 230 aaPredicted RBP4.41□□□□□ -1.7
PTCD3-219ENST00000494323 UPK3AO75631 287 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 CECR9P0C854 216 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 GKN3PP0CG01 181 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 PSG1P11464 419 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 ANXA7P20073 488 aaKnown RBP4.41□□□□□ -1.7
PTCD3-219ENST00000494323 NPR2P20594 1047 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 CXCR1P25024 350 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 FKBP2P26885 142 aaKnown RBP4.41□□□□□ -1.7
PTCD3-219ENST00000494323 GIFP27352 417 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 ARRB2P32121 409 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 SLC1A3P43003 542 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms