RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 TMEM171Q8WVE6 324 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 HCAR1Q9BXC0 346 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 HINT3Q9NQE9 182 aaKnown RBP10.79□□□□□ -0.68
TRA2A-209ENST00000494255 CA10Q9NS85 328 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 MRPL22Q9NWU5 206 aaKnown RBP10.79□□□□□ -0.68
TRA2A-209ENST00000494255 EIF3KQ9UBQ5 218 aaKnown RBP10.79□□□□□ -0.68
TRA2A-209ENST00000494255 NDRG4Q9ULP0 352 aaKnown RBP10.79□□□□□ -0.68
TRA2A-209ENST00000494255 LAMP3Q9UQV4 416 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 LHFPL6Q9Y693 200 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 FBN2P35556 2912 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 DSCAMO60469 2012 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 C5orf49A4QMS7 147 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 RER1O15258 196 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 PRODHO43272 600 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 GLCEO94923 617 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 SNAP29O95721 258 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 TTKP33981 857 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 ENTPD1P49961 510 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 RPS7P62081 194 aaKnown RBP10.79□□□□□ -0.68
TRA2A-209ENST00000494255 RAB35Q15286 201 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 KLHL12Q53G59 568 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 C12orf73Q69YU5 71 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 UNQ6126/PRO20091Q6UXV3 157 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 VASH1Q7L8A9 365 aaPredicted RBP10.79□□□□□ -0.68
TRA2A-209ENST00000494255 TCEANCQ8N8B7 351 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 PTP4A1Q93096 173 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 POM121L2Q96KW2 1035 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 CXorf56Q9H5V9 222 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 ZNF442Q9H7R0 627 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 H2AFY2Q9P0M6 372 aaPredicted RBP10.79□□□□□ -0.68
TRA2A-209ENST00000494255 COMMD3-BMI1R4GMX3 469 aa10.79□□□□□ -0.68
TRA2A-209ENST00000494255 ABCA12Q86UK0 2595 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 APCP25054 2843 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 H0YHG0 523 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 PRKYO43930 277 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 DANCRP0C864 163 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 GSTT1P30711 240 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 POLR2IP36954 125 aaKnown RBP10.78□□□□□ -0.68
TRA2A-209ENST00000494255 RAD52P43351 418 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 CDC42P60953 191 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 TRIP10Q15642 601 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 ZIK1Q3SY52 487 aaPredicted RBP10.78□□□□□ -0.68
TRA2A-209ENST00000494255 SLC35D3Q5M8T2 416 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 ELFN2Q5R3F8 820 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 CORO6Q6QEF8 472 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 ARL9Q6T311 187 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 LYPD4Q6UWN0 246 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 LINC00346Q8IVM7 164 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 MUC15Q8N387 334 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 OR1F12Q8NHA8 337 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 ZNRF4Q8WWF5 429 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 MBD6Q96DN6 1003 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 INTS14Q96SY0 518 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 PITX2Q99697 317 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 BCL2L14Q9BZR8 327 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 GRIP2Q9C0E4 1043 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 HDHD2Q9H0R4 259 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 CBLN4Q9NTU7 201 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 BEX4Q9NWD9 120 aaPredicted RBP10.78□□□□□ -0.68
TRA2A-209ENST00000494255 CYB5R1Q9UHQ9 305 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 ATPIF1Q9UII2 106 aa10.78□□□□□ -0.68
TRA2A-209ENST00000494255 GDF2Q9UK05 429 aaPredicted RBP10.78□□□□□ -0.68
TRA2A-209ENST00000494255 ROS1P08922 2347 aa10.77□□□□□ -0.68
TRA2A-209ENST00000494255 HRNRQ86YZ3 2850 aaPredicted RBP10.77□□□□□ -0.69
TRA2A-209ENST00000494255 LOC100509620A0A075B734 347 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 OR6C6A6NF89 314 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 ZNF593O00488 134 aaPredicted RBP10.77□□□□□ -0.69
TRA2A-209ENST00000494255 SYNGR3O43761 229 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 TLX2O43763 284 aaPredicted RBP10.77□□□□□ -0.69
TRA2A-209ENST00000494255 SMPD2O60906 423 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 SOD3P08294 240 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 SPARCP09486 303 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 FAM157BP0CG42 384 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 BMP4P12644 408 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 PCSK6P29122 969 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 THBS4P35443 961 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 GGT2P36268 569 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 SERPINF1P36955 418 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 HIST1H3AP68431 136 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 NKX6-1P78426 367 aaPredicted RBP10.77□□□□□ -0.69
TRA2A-209ENST00000494255 APOFQ13790 326 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 DEFB113Q30KQ7 82 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 CCDC92Q53HC0 331 aaPredicted RBP10.77□□□□□ -0.69
TRA2A-209ENST00000494255 HIST2H3PS2Q5TEC6 136 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 LINC01590Q5TEZ4 76 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 LCN1P1Q5VSP4 162 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 SLC18B1Q6NT16 456 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 TMEM154Q6P9G4 183 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 HIST2H3AQ71DI3 136 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 ZNF771Q7L3S4 317 aaPredicted RBP10.77□□□□□ -0.69
TRA2A-209ENST00000494255 DTX2Q86UW9 622 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 ERI1Q8IV48 349 aaKnown RBP10.77□□□□□ -0.69
TRA2A-209ENST00000494255 PAQR4Q8N4S7 273 aaPredicted RBP10.77□□□□□ -0.69
TRA2A-209ENST00000494255 BBS1Q8NFJ9 593 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 OR6N2Q8NGY6 317 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 TMEM163Q8TC26 289 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 ZMYND19Q96E35 227 aaPredicted RBP10.77□□□□□ -0.69
TRA2A-209ENST00000494255 IL4I1Q96RQ9 567 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 SLC29A1Q99808 456 aa10.77□□□□□ -0.69
TRA2A-209ENST00000494255 TRAF4Q9BUZ4 470 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms