RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 MPC2O95563 127 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 RAF1P04049 648 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 CYC1P08574 325 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 RGS19P49795 217 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 CAPZA1P52907 286 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 DLX5P56178 289 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 PITPNAQ00169 270 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 HYAL4Q2M3T9 481 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 KDM8Q8N371 416 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 OR10G3Q8NGC4 313 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 OTOSQ8NHW6 89 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 SMIM4Q8WVI0 70 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 NXPE2Q96DL1 559 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 SLC25A38Q96DW6 304 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 ANKRD10Q9NXR5 420 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 PRELID3BQ9Y3B1 194 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 SLC22A23A1A5C7 686 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 CFDP00746 253 aaPredicted RBP12.35□□□□□ -0.43
VCP-207ENST00000493886 HLA-DOBP13765 273 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 CTLA4P16410 223 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 RAB14P61106 215 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 PUDPQ08623 228 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 OR7A5Q15622 319 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 AGBL5Q8NDL9 886 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 ZNF248Q8NDW4 579 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 MFSD8Q8NHS3 518 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 NSMAFQ92636 917 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 WDR89Q96FK6 387 aaPredicted RBP12.35□□□□□ -0.43
VCP-207ENST00000493886 AMELYQ99218 206 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 DEFB126Q9BYW3 111 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 HEXA-AS1Q9H8Q6 139 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 WDR54Q9H977 334 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 DLL4Q9NR61 685 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 ELF5Q9UKW6 265 aaPredicted RBP12.35□□□□□ -0.43
VCP-207ENST00000493886 CAMK2AQ9UQM7 478 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 COL6A3P12111 3177 aa12.35□□□□□ -0.43
VCP-207ENST00000493886 IGLV1-36A0A0B4J1U3 117 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 MS4A18H0YCH9 400 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 GATCO43716 136 aaKnown RBP12.34□□□□□ -0.43
VCP-207ENST00000493886 HOXD4P09016 255 aaPredicted RBP12.34□□□□□ -0.43
VCP-207ENST00000493886 TMIGD3P0DMS9 266 aaPredicted RBP12.34□□□□□ -0.43
VCP-207ENST00000493886 PTGDSP41222 190 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 CAMK2DQ13557 499 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 TRA2AQ13595 282 aaKnown RBP eCLIP12.34□□□□□ -0.43
VCP-207ENST00000493886 EXOSC2Q13868 293 aaKnown RBP12.34□□□□□ -0.43
VCP-207ENST00000493886 ETFDHQ16134 617 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 MS4A18Q3C1V0 323 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 LRRC69Q6ZNQ3 347 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.34□□□□□ -0.43
VCP-207ENST00000493886 FTMTQ8N4E7 242 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 OR11G2Q8NGC1 345 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 OR2G2Q8NGZ5 317 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 METTL7AQ9H8H3 244 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 GPN3Q9UHW5 284 aaPredicted RBP12.34□□□□□ -0.43
VCP-207ENST00000493886 NXT1Q9UKK6 140 aaKnown RBP12.34□□□□□ -0.43
VCP-207ENST00000493886 SHISA8B8ZZ34 492 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 PDCD5O14737 125 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 ZNF208O43345 1280 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 ITGA10O75578 1167 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 FBXO45P0C2W1 286 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 MSX1P28360 303 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 DCTDP32321 178 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 ZFP36L1Q07352 338 aaKnown RBP12.34□□□□□ -0.43
VCP-207ENST00000493886 PLA2G7Q13093 441 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 Q499Y3 187 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 UBE2NLQ5JXB2 153 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 ZNF782Q6ZMW2 699 aaPredicted RBP12.34□□□□□ -0.43
VCP-207ENST00000493886 ATOH1Q92858 354 aaPredicted RBP12.34□□□□□ -0.43
VCP-207ENST00000493886 DDIT4LQ96D03 193 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 HRASLSQ9HDD0 168 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 MRPL22Q9NWU5 206 aaKnown RBP12.34□□□□□ -0.43
VCP-207ENST00000493886 ZDBF2Q9HCK1 2354 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 RALGAPA1Q6GYQ0 2036 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 IFITM5A6NNB3 132 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 ETV2O00321 342 aaPredicted RBP12.34□□□□□ -0.43
VCP-207ENST00000493886 TPOP07202 933 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 KLK3P07288 261 aaPredicted RBP12.34□□□□□ -0.43
VCP-207ENST00000493886 SULT1A3P0DMM9 295 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 SULT1A4P0DMN0 295 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 CCL4P13236 92 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 RAD52P43351 418 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 CCR9P51686 369 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 ZNF41P51814 821 aaPredicted RBP12.34□□□□□ -0.43
VCP-207ENST00000493886 ZP4Q12836 540 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 PCOLCEQ15113 449 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 AARDQ4LEZ3 155 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 SLC23A3Q6PIS1 610 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 H1FNTQ75WM6 255 aaPredicted RBP12.34□□□□□ -0.43
VCP-207ENST00000493886 DMRTC2Q8IXT2 367 aaPredicted RBP12.34□□□□□ -0.43
VCP-207ENST00000493886 OR56B4Q8NH76 319 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 SYNPRQ8TBG9 265 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 RASL10BQ96S79 203 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 C1QTNF6Q9BXI9 259 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 B3GNT2Q9NY97 397 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 WIF1Q9Y5W5 379 aa12.34□□□□□ -0.43
VCP-207ENST00000493886 TECTAO75443 2155 aa12.33□□□□□ -0.44
VCP-207ENST00000493886 MEIKINA0A087WXM9 373 aa12.33□□□□□ -0.44
VCP-207ENST00000493886 OR4C45A6NMZ5 311 aa12.33□□□□□ -0.44
VCP-207ENST00000493886 HSPB2A8KAH6 182 aa12.33□□□□□ -0.44
VCP-207ENST00000493886 ANXA7P20073 488 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms