RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 C15orf40Q8WUR7 153 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 SLC38A4Q969I6 547 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 PLIN2Q99541 437 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 HMG20AQ9NP66 347 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 ZNRD1Q9P1U0 126 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 VANGL2Q9ULK5 521 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 RRP15Q9Y3B9 282 aaKnown RBP2.02□□□□□ -2.09
SMC4-223ENST00000493695 TMEM14AQ9Y6G1 99 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 COL5A1P20908 1838 aaPredicted RBP2.02□□□□□ -2.09
SMC4-223ENST00000493695 TNS2Q63HR2 1409 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 OR2AG2A6NM03 316 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 LRRIQ3A6PVS8 624 aaPredicted RBP2.01□□□□□ -2.09
SMC4-223ENST00000493695 SOCS1O15524 211 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 RNF13O43567 381 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 CIB2O75838 187 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 OR2J3O76001 311 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 OR2F2O95006 317 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 YIF1AO95070 293 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 KRT14P02533 472 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 SERPINE2P07093 398 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 RHOXF2BP0C7M4 288 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 CT45A6P0DMU7 189 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 CT45A5P0DMU8 189 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 CT45A7P0DMV0 189 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 MUC1P15941 1255 aaPredicted RBP2.01□□□□□ -2.09
SMC4-223ENST00000493695 TCN2P20062 427 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 F2RP25116 425 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 RND2P52198 227 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 RAB10P61026 200 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 RAP1AP62834 184 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 PRR3P79522 188 aaKnown RBP2.01□□□□□ -2.09
SMC4-223ENST00000493695 HMGN5P82970 282 aaKnown RBP2.01□□□□□ -2.09
SMC4-223ENST00000493695 MRPL23Q16540 153 aaKnown RBP2.01□□□□□ -2.09
SMC4-223ENST00000493695 CT45A1Q5HYN5 189 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 PRAMEF20Q5VT98 475 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 C9orf135Q5VTT2 229 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 UBE2UQ5VVX9 321 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 NANOGP8Q6NSW7 305 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 REEP3Q6NUK4 255 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 SCD5Q86SK9 330 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 CT45A3Q8NHU0 189 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 ESR2Q92731 530 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 PDXPQ96GD0 296 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 CENPKQ9BS16 269 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 ANKRA2Q9H9E1 313 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 KCNJ16Q9NPI9 418 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 MTCH1Q9NZJ7 389 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 UVRAGQ9P2Y5 699 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 UXTQ9UBK9 157 aaPredicted RBP2.01□□□□□ -2.09
SMC4-223ENST00000493695 AHDC1Q5TGY3 1603 aaPredicted RBP2.01□□□□□ -2.09
SMC4-223ENST00000493695 OTOGLQ3ZCN5 2332 aa2.01□□□□□ -2.09
SMC4-223ENST00000493695 SCAMP2O15127 329 aaKnown RBP2□□□□□ -2.09
SMC4-223ENST00000493695 NUPL2O15504 423 aaKnown RBP2□□□□□ -2.09
SMC4-223ENST00000493695 B4GALT5O43286 388 aa2□□□□□ -2.09
SMC4-223ENST00000493695 EIF4E2O60573 245 aaKnown RBP2□□□□□ -2.09
SMC4-223ENST00000493695 CLDN11O75508 207 aa2□□□□□ -2.09
SMC4-223ENST00000493695 SLC25A14O95258 325 aaPredicted RBP2□□□□□ -2.09
SMC4-223ENST00000493695 FTH1P02794 183 aa2□□□□□ -2.09
SMC4-223ENST00000493695 CTSLP07711 333 aa2□□□□□ -2.09
SMC4-223ENST00000493695 ANXA5P08758 320 aa2□□□□□ -2.09
SMC4-223ENST00000493695 ATF6P18850 670 aa2□□□□□ -2.09
SMC4-223ENST00000493695 WARSP23381 471 aaKnown RBP2□□□□□ -2.09
SMC4-223ENST00000493695 DCKP27707 260 aa2□□□□□ -2.09
SMC4-223ENST00000493695 GDI1P31150 447 aa2□□□□□ -2.09
SMC4-223ENST00000493695 SLC1A1P43005 524 aa2□□□□□ -2.09
SMC4-223ENST00000493695 CSNK1EP49674 416 aaKnown RBP2□□□□□ -2.09
SMC4-223ENST00000493695 SELENBP1Q13228 472 aa2□□□□□ -2.09
SMC4-223ENST00000493695 IRF4Q15306 451 aa2□□□□□ -2.09
SMC4-223ENST00000493695 SF3A2Q15428 464 aaKnown RBP2□□□□□ -2.09
SMC4-223ENST00000493695 RGNQ15493 299 aa2□□□□□ -2.09
SMC4-223ENST00000493695 HSDL1Q3SXM5 330 aa2□□□□□ -2.09
SMC4-223ENST00000493695 CARD17Q5XLA6 110 aa2□□□□□ -2.09
SMC4-223ENST00000493695 TMEM150AQ86TG1 271 aa2□□□□□ -2.09
SMC4-223ENST00000493695 NPWQ8N729 165 aa2□□□□□ -2.09
SMC4-223ENST00000493695 OR4A4PQ8NGN8 299 aa2□□□□□ -2.09
SMC4-223ENST00000493695 TM4SF18Q96CE8 201 aa2□□□□□ -2.09
SMC4-223ENST00000493695 KRTAP4-1Q9BYQ7 146 aa2□□□□□ -2.09
SMC4-223ENST00000493695 HRASLS2Q9NWW9 162 aa2□□□□□ -2.09
SMC4-223ENST00000493695 GGA2Q9UJY4 613 aa2□□□□□ -2.09
SMC4-223ENST00000493695 ITGB4P16144 1822 aa2□□□□□ -2.09
SMC4-223ENST00000493695 DENND4AQ7Z401 1863 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 A0A1W2PP18 115 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 TMEM223A0PJW6 202 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 TRIM64CA6NLI5 447 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 BPY2O14599 106 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 AIM2O14862 343 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 AGTP01019 485 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 LINC00869P0C866 280 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 RRM2P31350 389 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 QPRTQ15274 297 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 PTPN20Q4JDL3 420 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 SOHLH1Q5JUK2 328 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 ZNF684Q5T5D7 378 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 AVPI1Q5T686 147 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 FBXW9Q5XUX1 488 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 C22orf42Q6IC83 251 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 PLET1Q6UQ28 207 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 NPSR1Q6W5P4 371 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 SLC16A14Q7RTX9 510 aa1.99□□□□□ -2.09
SMC4-223ENST00000493695 RIMKLAQ8IXN7 391 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms