RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ERAL1O75616 437 aaKnown RBP6.23□□□□□ -1.41
VPS13B-205ENST00000493587 SCGB1D2O95969 90 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 LRG1P02750 347 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 IL3P08700 152 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 IL6RP08887 468 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-205ENST00000493587 PAX1P15863 534 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 GPX2P18283 190 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 PRRX1P54821 245 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 LILRA4P59901 499 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 RPS26P62854 115 aaKnown RBP6.23□□□□□ -1.41
VPS13B-205ENST00000493587 H3F3AP84243 136 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 IHHQ14623 411 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 RAB11BQ15907 218 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 GXYLT1Q4G148 440 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF468Q5VIY5 522 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-205ENST00000493587 MRM1Q6IN84 353 aaKnown RBP6.23□□□□□ -1.41
VPS13B-205ENST00000493587 LINGO4Q6UY18 593 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 SLC35E3Q7Z769 313 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 RTN4RL1Q86UN2 441 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-205ENST00000493587 ARHGAP12Q8IWW6 846 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 C1orf87Q8N0U7 546 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF738Q8NE65 137 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 TET1Q8NFU7 2136 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 OR2D3Q8NGH3 330 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 OR5W2Q8NH69 310 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 SYNPRQ8TBG9 265 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 GPR119Q8TDV5 335 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 DERL3Q96Q80 235 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 TBX15Q96SF7 602 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 TXN2Q99757 166 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 ISG20L2Q9H9L3 353 aaKnown RBP6.23□□□□□ -1.41
VPS13B-205ENST00000493587 B3GAT1Q9P2W7 334 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 HDGFL3Q9Y3E1 203 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 HS3ST3B1Q9Y662 390 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 SERTM1A2A2V5 107 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 SYT7O43581 403 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 ALOX12BO75342 701 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 MTX2O75431 263 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 PMS2P2O95744 297 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 TK1P04183 234 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 EPHX1P07099 455 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 CD14P08571 375 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 PRSS56P0CW18 603 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 UBE2V1Q13404 147 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 UPP1Q16831 310 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 TCTN1Q2MV58 587 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 MIDNQ504T8 468 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 YOD1Q5VVQ6 348 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-205ENST00000493587 C12orf73Q69YU5 71 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 PRICKLE2Q7Z3G6 844 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 TMEM183AQ8IXX5 376 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 PNLDC1Q8NA58 520 aaKnown RBP6.23□□□□□ -1.41
VPS13B-205ENST00000493587 TMEM104Q8NE00 496 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 OR2AP1Q8NGE2 309 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 ABHD4Q8TB40 342 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 SDSLQ96GA7 329 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 NUDT9Q9BW91 350 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 TAF9BQ9HBM6 251 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 CORO2BQ9UQ03 480 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 PIN4Q9Y237 131 aaKnown RBP6.23□□□□□ -1.41
VPS13B-205ENST00000493587 TRANK1O15050 2925 aa6.23□□□□□ -1.41
VPS13B-205ENST00000493587 A0A1B0GV72 72 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 SLC22A31A6NKX4 558 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF354AO60765 605 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-205ENST00000493587 CD5P06127 495 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 OR5AC1P0C628 307 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 SLC35G6P0C7Q6 338 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 FGF5P12034 268 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 RAB28P51157 221 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 P2RX1P51575 399 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF41P51814 821 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-205ENST00000493587 TAS2R38P59533 333 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 TRA2BP62995 288 aaKnown RBP6.22□□□□□ -1.41
VPS13B-205ENST00000493587 CHIT1Q13231 466 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 DUSP5Q16690 384 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 MST1LQ2TV78 715 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 VWA2Q5GFL6 755 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 PODNL1Q6PEZ8 512 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF322Q6U7Q0 402 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-205ENST00000493587 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.22□□□□□ -1.41
VPS13B-205ENST00000493587 NRMQ8IXM6 262 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 APCDD1Q8J025 514 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 GALNT16Q8N428 558 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 LMNTD1Q8N9Z9 388 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 OR13C9Q8NGT0 318 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 TSLPQ969D9 159 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 TIFAQ96CG3 184 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 CMBLQ96DG6 245 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 REEP6Q96HR9 211 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 SMIM3Q9BZL3 60 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF700Q9H0M5 742 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 SLC25A18Q9H1K4 315 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 PCED1AQ9H1Q7 454 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 OR10A5Q9H207 317 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 MFSD1Q9H3U5 465 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 CHODLQ9H9P2 273 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF701Q9NV72 531 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-205ENST00000493587 DDIT4Q9NX09 232 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 MARCH5Q9NX47 278 aa6.22□□□□□ -1.41
VPS13B-205ENST00000493587 HAO2Q9NYQ3 351 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms