RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 DPY19L2P2Q6ZN68 376 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 SLC16A9Q7RTY1 509 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 ZNF565Q8N9K5 539 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 ACBD4Q8NC06 268 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 OR6N2Q8NGY6 317 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 S100PBPQ96BU1 408 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 CMBLQ96DG6 245 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 AMELYQ99218 206 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 PRDM13Q9H4Q3 707 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 WDR76Q9H967 626 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 TAF9BQ9HBM6 251 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 SLC2A4RGQ9NR83 387 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 SLC22A13Q9Y226 551 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 MRPS18BQ9Y676 258 aaKnown RBP10.55□□□□□ -0.72
HDAC4-210ENST00000493582 SLC35G4P0C7Q5 338 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 RAB6AP20340 208 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 ACTR1BP42025 376 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 KIR3DL2P43630 455 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 TDGQ13569 410 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 WDR38Q5JTN6 314 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 KIRREL2Q6UWL6 708 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 RNF44Q7L0R7 432 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 OR51F2Q8NH61 342 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 CMKLR1Q99788 373 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 PRRT1Q99946 306 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 TGIF2Q9GZN2 237 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 SPACA1Q9HBV2 294 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 DCAF16Q9NXF7 216 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 AMDHD2Q9Y303 409 aa10.55□□□□□ -0.72
HDAC4-210ENST00000493582 KIAA1549LQ6ZVL6 1849 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 DOK2O60496 412 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 DUS4LO95620 317 aaKnown RBP10.54□□□□□ -0.72
HDAC4-210ENST00000493582 AK1P00568 194 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 ADRB3P13945 408 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 TACR3P29371 465 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 PMELP40967 661 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 NDUFA6P56556 154 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 DMWDQ09019 674 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 LY6G5CQ5SRR4 150 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 Q6ZRG5 221 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 TTLL10Q6ZVT0 673 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 FOXRED2Q8IWF2 684 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 TMEFF1Q8IYR6 380 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 LRFN5Q96NI6 719 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 OPA3Q9H6K4 179 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 KPTNQ9Y664 436 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 TMEM212A6NML5 194 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 MOSPD3O75425 235 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 HTR2CP28335 458 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 SULT1A1P50225 295 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 KIAA0141Q14154 515 aaPredicted RBP10.54□□□□□ -0.72
HDAC4-210ENST00000493582 SEMA6DQ8NFY4 1073 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 SLC25A43Q8WUT9 341 aaPredicted RBP10.54□□□□□ -0.72
HDAC4-210ENST00000493582 ASB17Q8WXJ9 295 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 IGSF21Q96ID5 467 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 FOXN4Q96NZ1 517 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 KXD1Q9BQD3 176 aa10.54□□□□□ -0.72
HDAC4-210ENST00000493582 ARGFXA6NJG6 315 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 GRXCR1A8MXD5 290 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 ADH1AP07327 375 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 HOXB5P09067 269 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 ZNF888P0CJ79 500 aaPredicted RBP10.53□□□□□ -0.72
HDAC4-210ENST00000493582 HOXA5P20719 270 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 S100A2P29034 98 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 HRH1P35367 487 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 EEF1A1P5Q5VTE0 462 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 FAM166AQ6J272 317 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 GKN2Q86XP6 184 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 MARCH1Q8TCQ1 289 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 TGM7Q96PF1 710 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 TUBA4BQ9H853 241 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 MKKSQ9NPJ1 570 aaPredicted RBP10.53□□□□□ -0.72
HDAC4-210ENST00000493582 LRRK1Q38SD2 2015 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 CXorf51AA0A1B0GTR3 108 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 DBX1A6NMT0 343 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 OR52A4PA6NMU1 304 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 OR10H2O60403 315 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 BRINP1O60477 761 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 PMP2P02689 132 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 F13BP05160 661 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 MAP3K8P41279 467 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 SLC6A9P48067 706 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 SLC9A3R2Q15599 337 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 DEFB134Q4QY38 66 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 ACTBL2Q562R1 376 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 FJX1Q86VR8 437 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 ZNF615Q8N8J6 731 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 CCDC54Q8NEL0 328 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 OR51A2Q8NGJ7 313 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 OR10D4PQ8NGN7 298 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 ZCCHC10Q8TBK6 192 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 IRF7Q92985 503 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 NMES1Q9C002 83 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 CHST5Q9GZS9 411 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 SLC5A7Q9GZV3 580 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 SLCO5A1Q9H2Y9 848 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 PRO1933Q9H354 126 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 SLC17A5Q9NRA2 495 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 MKI67P46013 3256 aaKnown RBP10.53□□□□□ -0.72
HDAC4-210ENST00000493582 WIPF3A6NGB9 483 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms