RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 GGTA1PQ4G0N0 100 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 PIGGQ5H8A4 983 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 C9orf152Q5JTZ5 239 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 ELFN2Q5R3F8 820 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 C9orf135Q5VTT2 229 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 RAET1LQ5VY80 246 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 LIPJQ5W064 366 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 SLC22A10Q63ZE4 541 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 HIST2H2AA3Q6FI13 130 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 OR4F3Q6IEY1 312 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 FAM71E1Q6IPT2 247 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 KRT80Q6KB66 452 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 CBLN3Q6UW01 205 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 COMTD1Q86VU5 262 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 WDFY1Q8IWB7 410 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 CNPY4Q8N129 248 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 LRRC25Q8N386 305 aaPredicted RBP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 LIX1Q8N485 282 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF781Q8N8C0 355 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 CNEP1R1Q8N9A8 125 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 OR11H4Q8NGC9 324 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 OR4K14Q8NGD5 310 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 OR9I1Q8NGQ6 314 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 RHEBL1Q8TAI7 183 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 NEIL3Q8TAT5 605 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 FNDC9Q8TBE3 224 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 PAQR8Q8TEZ7 354 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 AENQ8WTP8 325 aaKnown RBP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 TWIST2Q8WVJ9 160 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 ROBO4Q8WZ75 1007 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 L3HYPDHQ96EM0 354 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 C11orf24Q96F05 449 aaPredicted RBP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 CHMP6Q96FZ7 201 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 AURKBQ96GD4 344 aaPredicted RBP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 TEX37Q96LM6 180 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 VSTM2LQ96N03 204 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 SFXN2Q96NB2 322 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF382Q96SR6 550 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 SERPINI1Q99574 410 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 MRPL57Q9BQC6 102 aaKnown RBP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 INPP5KQ9BT40 448 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 NTMT1Q9BV86 223 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 PINK1Q9BXM7 581 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 RSPO3Q9BXY4 272 aaPredicted RBP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 FUT8Q9BYC5 575 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 SRXN1Q9BYN0 137 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 OR11A1Q9GZK7 315 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 UBQLN3Q9H347 655 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 CENPHQ9H3R5 247 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 KCNK15Q9H427 330 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 HEXA-AS1Q9H8Q6 139 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 TRIM45Q9H8W5 580 aaPredicted RBP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 IL1RL2Q9HB29 575 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 SERINC1Q9NRX5 453 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 LYARQ9NX58 379 aaKnown RBP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 PSMC3IPQ9P2W1 217 aaPredicted RBP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 CLCF1Q9UBD9 225 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 CTSZQ9UBR2 303 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF639Q9UID6 485 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 DKKL1Q9UK85 242 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 MRPS33Q9Y291 106 aaKnown RBP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF337Q9Y3M9 751 aa2.45□□□□□ -2.02
PTCD3-218ENST00000493430 ANK3Q12955 4377 aaKnown RBP2.45□□□□□ -2.02
PTCD3-218ENST00000493430 A0A0J9YW62 118 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 URADA6NGE7 173 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 ENO4A6NNW6 628 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 SYCE1LA8MT33 242 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 DEFB108AA8MXU0 73 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 KLRC4-KLRK1H3BQV0 150 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 COPEO14579 308 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 TNFSF11O14788 317 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 AZIN1O14977 448 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 LSM1O15116 133 aaKnown RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 CXCL13O43927 109 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 SEC22BO75396 215 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 CRCPO75575 148 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 CTAG2O75638 210 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 TNFSF13O75888 250 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 SEMA3DO95025 777 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 ZWINTO95229 277 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 UTS2O95399 124 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 TGDSO95455 350 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 H6PDO95479 791 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 CPSF4O95639 269 aaKnown RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 OXSR1O95747 527 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 OTCP00480 354 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 HPNP05981 417 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 MELTFP08582 738 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 ABHD2P08910 425 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 HOXD4P09016 255 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 GSTA2P09210 222 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 SLC35E2P0CK97 266 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 VPREB1P12018 145 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 BCKDHAP12694 445 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 ICAM2P13598 275 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 CPA3P15088 417 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 CSNK2A2P19784 350 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 IMPDH1P20839 514 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 DPP4P27487 766 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms