RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 SRP14P37108 136 aaKnown RBP7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 COMPP49747 757 aaPredicted RBP7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 LSM6P62312 80 aaKnown RBP7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 HIST1H3AP68431 136 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 TOP3AQ13472 1001 aaPredicted RBP7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 KRTAP27-1Q3LI81 207 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 HIST2H3PS2Q5TEC6 136 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 GPR139Q6DWJ6 353 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 Q6ZR03 302 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 HIST2H3AQ71DI3 136 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 VASH1Q7L8A9 365 aaPredicted RBP7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 ZER1Q7Z7L7 766 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 IGFN1Q86VF2 1251 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 TEX29Q8N6K0 151 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 ABHD4Q8TB40 342 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 HAVCR1Q96D42 359 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 RAB39BQ96DA2 213 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 HSH2DQ96JZ2 352 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 Q96M85 177 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 SAP30LQ9HAJ7 183 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 ELOVL3Q9HB03 270 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 MED4Q9NPJ6 270 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 DECR2Q9NUI1 292 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 DCAF13Q9NV06 445 aaKnown RBP7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 GRHPRQ9UBQ7 328 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 ATPIF1Q9UII2 106 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 NDRG4Q9ULP0 352 aaKnown RBP7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 TMEM5Q9Y2B1 443 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 ADAM18Q9Y3Q7 739 aa7.09□□□□□ -1.27
SMARCB1-207ENST00000491967 PLSCR5A0PG75 271 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 J3QW42 95 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 SPRY3O43610 288 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 MPZL1O95297 269 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 FSTL3O95633 263 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 ZNF682O95780 498 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 IGHV2-70P01814 119 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 SEMG1P04279 462 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 CCNOP22674 350 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 PRDX6P30041 224 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 SDHAP31040 664 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 GUCA1AP43080 201 aaPredicted RBP7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 GPR4P46093 362 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 ARHGDIAP52565 204 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 HILS1P60008 231 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 MVKQ03426 396 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 SLC3A1Q07837 685 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 SCRN3Q0VDG4 424 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 SF3A3Q12874 501 aaKnown RBP eCLIP7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 SEC23BQ15437 767 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 TSTQ16762 297 aaKnown RBP7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 RSPO1Q2MKA7 263 aaPredicted RBP7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 ZMAT1Q5H9K5 638 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 MTX3Q5HYI7 312 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 SPATA46Q5T0L3 261 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 AVPI1Q5T686 147 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 FAHD2BQ6P2I3 314 aaPredicted RBP7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 ARL9Q6T311 187 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 THSD4Q6ZMP0 1018 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 DPY19L2P2Q6ZN68 376 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 RINLQ6ZS11 566 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 COLCA1Q6ZS62 124 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 FKBP9P1Q75LS8 142 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 C1QL2Q7Z5L3 287 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 ADCK1Q86TW2 530 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 ZNF283Q8N7M2 679 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 NPEPL1Q8NDH3 523 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 FAM216AQ8WUB2 273 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 RAB1CQ92928 201 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 FAHD2AQ96GK7 314 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 TIMD4Q96H15 378 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 SAMD8Q96LT4 415 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 SIGLEC11Q96RL6 698 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 GPA33Q99795 319 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 EGLN1Q9GZT9 426 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 POFUT1Q9H488 388 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 NARFLQ9H6Q4 476 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 METTL17Q9H7H0 456 aaPredicted RBP7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 GORASP2Q9H8Y8 452 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 EMC7Q9NPA0 242 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 OPN4Q9UHM6 478 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 STARD10Q9Y365 291 aa7.08□□□□□ -1.28
SMARCB1-207ENST00000491967 A0A0G2JMP0 313 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 TRBV4-1A0A0J9YWV2 114 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 A0A0X1KG70 313 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 TMEM89A2RUT3 159 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 H7C1C5 153 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 XKRYO14609 159 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 IMPA2O14732 288 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 ARPC3O15145 178 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 SGCEO43556 437 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 KHDRBS3O75525 346 aaKnown RBP7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 NDUFB2O95178 105 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 H1F0P07305 194 aaKnown RBP7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 RAC2P15153 192 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 CPT2P23786 658 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 ZFP36P26651 326 aaKnown RBP7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 RPL4P36578 427 aaKnown RBP7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 CDKN2AP42771 156 aaKnown RBP7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 PSME3P61289 254 aa7.07□□□□□ -1.28
SMARCB1-207ENST00000491967 LCN6P62502 163 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms