RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 GLB1L2Q8IW92 636 aa14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 PAQR4Q8N4S7 273 aaPredicted RBP14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 RNF148Q8N7C7 305 aa14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 OR5L1Q8NGL2 311 aa14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 OR51F2Q8NH61 342 aa14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 GPX7Q96SL4 187 aaPredicted RBP14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 PLEK2Q9NYT0 353 aa14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 MYEF2Q9P2K5 600 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 ARFGEF3Q5TH69 2177 aa14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 CHD3Q12873 2000 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-217ENST00000491330 SURF4O15260 269 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 PHF1O43189 567 aaPredicted RBP14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 DOK2O60496 412 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 SLC16A7O60669 478 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 CDC14BO60729 498 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 RENP00797 406 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 HTR5AP47898 357 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 RGS6P49758 472 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 LSM6P62312 80 aaKnown RBP14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 SPIBQ01892 262 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 TRIM25Q14258 630 aaKnown RBP14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 TSTQ16762 297 aaKnown RBP14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 MSMPQ1L6U9 139 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 LCN8Q6JVE9 175 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 ZNF774Q6NX45 483 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 FOXL2NBQ6ZUU3 175 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 TSEN54Q7Z6J9 526 aaKnown RBP14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 LRRC75AQ8NAA5 344 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 OR52J3Q8NH60 311 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 KLF14Q8TD94 323 aaPredicted RBP14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 BCAS4Q8TDM0 211 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 RSRC1Q96IZ7 334 aaKnown RBP14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 Q96M85 177 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 OR2J1Q9GZK6 312 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 NARFLQ9H6Q4 476 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 TBCCD1Q9NVR7 557 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 METRNQ9UJH8 293 aa14.16□□□□□ -0.14
PDLIM2-217ENST00000491330 TEX13CA0A0J9YWL9 993 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 SPRY3O43610 288 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 TNFRSF1AP19438 455 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 SLC6A6P31641 620 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 MAGEB1P43366 347 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 LIMS1P48059 325 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 ERVS71-1P61550 626 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 GLO1Q04760 184 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 TRIP10Q15642 601 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 SLC36A3Q495N2 470 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 DNAL1Q4LDG9 190 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 SPATA46Q5T0L3 261 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 ACSM5Q6NUN0 579 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 SMARCD3Q6STE5 483 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 USP51Q70EK9 711 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 TRPM8Q7Z2W7 1104 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 MEX3DQ86XN8 651 aaKnown RBP14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 RFLNBQ8N5W9 214 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 CLDND2Q8NHS1 167 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 SLC25A40Q8TBP6 338 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 ASB9Q96DX5 294 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 MARS2Q96GW9 593 aaKnown RBP14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 DCLRE1CQ96SD1 692 aaKnown RBP14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 REPIN1Q9BWE0 567 aaKnown RBP14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 CDADC1Q9BWV3 514 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 TRIM15Q9C019 465 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 WNT5BQ9H1J7 359 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 NRIP3Q9NQ35 241 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 SIGLEC7Q9Y286 467 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 ADAM18Q9Y3Q7 739 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 IER3IP1Q9Y5U9 82 aa14.15□□□□□ -0.14
PDLIM2-217ENST00000491330 LOC100509620A0A075B734 347 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 IGKV1D-43A0A0B4J1Z2 117 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 TRAV20A0A0B4J274 112 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 H7C1C5 153 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 J3QW42 95 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 CDC42EP2O14613 210 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 IMPA2O14732 288 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 OR10H3O60404 316 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 MSMBP08118 114 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 RRM2P31350 389 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 MAGEA2P43356 314 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 OMPP47874 163 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 HMGA2P52926 109 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 LCN6P62502 163 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 RPL13AP3Q6NVV1 102 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 DHFR2Q86XF0 187 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 ZDHHC21Q8IVQ6 265 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 CCL17Q92583 94 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 TMEM186Q96B77 213 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 C1orf159Q96HA4 380 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 FUZQ9BT04 418 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 SYT4Q9H2B2 425 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 TREM2Q9NZC2 230 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 VPS13CQ709C8 3753 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 CR1P17927 2039 aa14.14□□□□□ -0.15
PDLIM2-217ENST00000491330 OR6C6A6NF89 314 aa14.13□□□□□ -0.15
PDLIM2-217ENST00000491330 SOCS2O14508 198 aa14.13□□□□□ -0.15
PDLIM2-217ENST00000491330 TCF21O43680 179 aa14.13□□□□□ -0.15
PDLIM2-217ENST00000491330 IDH3BO43837 385 aa14.13□□□□□ -0.15
PDLIM2-217ENST00000491330 ICMTO60725 284 aa14.13□□□□□ -0.15
PDLIM2-217ENST00000491330 PTP4A3O75365 173 aa14.13□□□□□ -0.15
PDLIM2-217ENST00000491330 IGFBP1P08833 259 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms