RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, human

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-208	ENST00000490942	ZNRF4	Q8WWF5	429 aa		13.74	□□□□□ -0.21
TRA2A-208	ENST00000490942	HTRA1	Q92743	480 aa		13.74	□□□□□ -0.21
TRA2A-208	ENST00000490942	OTULIN	Q96BN8	352 aa		13.74	□□□□□ -0.21
TRA2A-208	ENST00000490942	HS3ST6	Q96QI5	342 aa		13.74	□□□□□ -0.21
TRA2A-208	ENST00000490942	INTS14	Q96SY0	518 aa		13.74	□□□□□ -0.21
TRA2A-208	ENST00000490942	TEAD3	Q99594	435 aa		13.74	□□□□□ -0.21
TRA2A-208	ENST00000490942	C1QTNF6	Q9BXI9	259 aa		13.74	□□□□□ -0.21
TRA2A-208	ENST00000490942	MED20	Q9H944	212 aa		13.74	□□□□□ -0.21
TRA2A-208	ENST00000490942	EDAR	Q9UNE0	448 aa		13.74	□□□□□ -0.21
TRA2A-208	ENST00000490942	LHFPL6	Q9Y693	200 aa		13.74	□□□□□ -0.21
TRA2A-208	ENST00000490942	HSPE1-MOB4	S4R3N1	261 aa		13.74	□□□□□ -0.21
TRA2A-208	ENST00000490942	UTP20	O75691	2785 aa	Known RBP	13.74	□□□□□ -0.21
TRA2A-208	ENST00000490942	FAM171A2	A8MVW0	826 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	SHISA9	B4DS77	424 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	STOM	P27105	288 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	PCSK6	P29122	969 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	APLNR	P35414	380 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	OCLN	Q16625	522 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	TBC1D28	Q2M2D7	210 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	KLHL12	Q53G59	568 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	HIST2H2BC	Q6DN03	193 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	UNQ6126/PRO20091	Q6UXV3	157 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	CDC20B	Q86Y33	519 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	TIGD4	Q8IY51	512 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	DHRSX	Q8N5I4	330 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	OR51L1	Q8NGJ5	315 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942		Q96MT0	163 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	FOXN4	Q96NZ1	517 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	IL4I1	Q96RQ9	567 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	DCLRE1C	Q96SD1	692 aa	Known RBP	13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	MNT	Q99583	582 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	COQ7	Q99807	217 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	WNT5B	Q9H1J7	359 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	PLEKHF2	Q9H8W4	249 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	PLEK2	Q9NYT0	353 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	WARS2	Q9UGM6	360 aa	Known RBP	13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	SPEF1	Q9Y4P9	236 aa		13.73	□□□□□ -0.21
TRA2A-208	ENST00000490942	CAD	P27708	2225 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	CCDC182	A6NF36	153 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	OR6C6	A6NF89	314 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942		J3QW42	95 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	ZNF593	O00488	134 aa	Predicted RBP	13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	SYNGR3	O43761	229 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	GPANK1	O95872	356 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	CELA3B	P08861	270 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	TUBG1	P23258	451 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	HTR1F	P30939	366 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	GDI2	P50395	445 aa	Known RBP	13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	RPS7	P62081	194 aa	Known RBP	13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	ADARB1	P78563	741 aa	Known RBP	13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	POU4F2	Q12837	409 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	APOF	Q13790	326 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	MEP1B	Q16820	701 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	ZNF672	Q499Z4	452 aa	Predicted RBP	13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	ELFN2	Q5R3F8	820 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	ZNF544	Q6NX49	715 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	SLC22A25	Q6T423	547 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	C20orf204	Q6ZNR8	217 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	VASH1	Q7L8A9	365 aa	Predicted RBP	13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	ZNF511	Q8NB15	262 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	SETD9	Q8NE22	299 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	CPEB3	Q8NE35	698 aa	Known RBP	13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	BBS1	Q8NFJ9	593 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	OR1F12	Q8NHA8	337 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	RHOXF1	Q8NHV9	184 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	NRG4	Q8WWG1	115 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	MS4A3	Q96HJ5	214 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	POM121L2	Q96KW2	1035 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	ADI1	Q9BV57	179 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	YIPF3	Q9GZM5	350 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	ZNF442	Q9H7R0	627 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	WDR76	Q9H967	626 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	TUBG2	Q9NRH3	451 aa		13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	DDX28	Q9NUL7	540 aa	Known RBP	13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	GDF2	Q9UK05	429 aa	Predicted RBP	13.72	□□□□□ -0.21
TRA2A-208	ENST00000490942	TVP23A	A6NH52	213 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	VSTM5	A8MXK1	200 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	HS3ST1	O14792	307 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	RER1	O15258	196 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	DOK2	O60496	412 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	PRF1	P14222	555 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	GABRB1	P18505	474 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	NR4A1	P22736	598 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	NUDT6	P53370	316 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	CDH11	P55287	796 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	RPS23	P62266	143 aa	Known RBP	13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	NKX6-1	P78426	367 aa	Predicted RBP	13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	CCDC92	Q53HC0	331 aa	Predicted RBP	13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	ZNF774	Q6NX45	483 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	ARL9	Q6T311	187 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	SLC16A9	Q7RTY1	509 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	MYPOP	Q86VE0	399 aa	Predicted RBP	13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	ZNF611	Q8N823	705 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	OTOS	Q8NHW6	89 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	RASSF4	Q9H2L5	321 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	CDH20	Q9HBT6	801 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	FAIM	Q9NVQ4	179 aa		13.71	□□□□□ -0.21
TRA2A-208	ENST00000490942	TMEM14A	Q9Y6G1	99 aa		13.71	□□□□□ -0.21

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