RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 NKAIN3Q8N8D7 197 aa10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 OR5AP2Q8NGF4 316 aa10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 CCDC74AQ96AQ1 378 aa10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 SLC17A9Q9BYT1 436 aa10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 TAS2R4Q9NYW5 299 aa10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 RHBDD3Q9Y3P4 386 aa10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 A0A1B0GV90 55 aa10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 ZNF729A6NN14 1252 aaPredicted RBP10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 RNH1P13489 461 aaKnown RBP10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 CTSEP14091 401 aa10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 DPP4P27487 766 aa10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 ARRB1P49407 418 aaPredicted RBP10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 LIMK1P53667 647 aa10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 ARF3P61204 181 aaPredicted RBP10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 RNF4P78317 190 aa10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 ARF1P84077 181 aaKnown RBP10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 SLC22A6Q4U2R8 563 aa10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 JMJD6Q6NYC1 403 aaPredicted RBP10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 FAM199XQ6PEV8 388 aaPredicted RBP10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 MS4A6EQ96DS6 147 aa10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 MALSU1Q96EH3 234 aa10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 ESRP2Q9H6T0 727 aaKnown RBP10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 TREM2Q9NZC2 230 aa10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 ST6GALNAC2Q9UJ37 374 aa10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 STRAPQ9Y3F4 350 aaKnown RBP10.28□□□□□ -0.76
CRNKL1-204ENST00000490910 TGOLN2O43493 480 aa10.27□□□□□ -0.76
CRNKL1-204ENST00000490910 NUDT21O43809 227 aaKnown RBP10.27□□□□□ -0.76
CRNKL1-204ENST00000490910 DOK2O60496 412 aa10.27□□□□□ -0.76
CRNKL1-204ENST00000490910 FBP1P09467 338 aa10.27□□□□□ -0.76
CRNKL1-204ENST00000490910 ADH5P11766 374 aa10.27□□□□□ -0.76
CRNKL1-204ENST00000490910 BCL6P41182 706 aa10.27□□□□□ -0.76
CRNKL1-204ENST00000490910 SMAD2Q15796 467 aaKnown RBP10.27□□□□□ -0.76
CRNKL1-204ENST00000490910 TMEM128Q5BJH2 165 aa10.27□□□□□ -0.76
CRNKL1-204ENST00000490910 OR52R1Q8NGF1 315 aa10.27□□□□□ -0.76
CRNKL1-204ENST00000490910 SLC17A5Q9NRA2 495 aa10.27□□□□□ -0.76
CRNKL1-204ENST00000490910 METTL1Q9UBP6 276 aaKnown RBP10.27□□□□□ -0.76
CRNKL1-204ENST00000490910 UBE2J1Q9Y385 318 aaPredicted RBP10.27□□□□□ -0.76
CRNKL1-204ENST00000490910 HYAL3O43820 417 aaPredicted RBP10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 YIF1AO95070 293 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 HBE1P02100 147 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 QDPRP09417 244 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 TMIGD3P0DMS9 266 aaPredicted RBP10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 ELNP15502 786 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 RAB4AP20338 218 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 CRABP1P29762 137 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 SULT1A1P50225 295 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 ELAVL3Q14576 367 aaKnown RBP10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 MISPQ8IVT2 679 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 CSNK1A1LQ8N752 337 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 HPSE2Q8WWQ2 592 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 SLC25A38Q96DW6 304 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 PGLYRP3Q96LB9 341 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 DUSP22Q9NRW4 184 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 PRODH2Q9UF12 536 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 IGLON5A6NGN9 336 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 ST8SIA5O15466 376 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 LILRB5O75023 590 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 NR2C1P13056 603 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 AKT2P31751 481 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 PKIAP61925 76 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 KCNAB1Q14722 419 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 RSPO2Q6UXX9 243 aaPredicted RBP10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 OR52E1Q8NGJ3 308 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 RRNAD1Q96FB5 475 aaKnown RBP10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 SPIN2AQ99865 258 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 SPIN2BQ9BPZ2 258 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 HCSTQ9UBK5 93 aa10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.27□□□□□ -0.77
CRNKL1-204ENST00000490910 DUS4LO95620 317 aaKnown RBP10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 GPR75O95800 540 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 HMGA1P17096 107 aaKnown RBP10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 TBPP20226 339 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 RPL23AP62750 156 aaKnown RBP10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 ZXDCQ2QGD7 858 aaPredicted RBP10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 TRMT12Q53H54 448 aaKnown RBP10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 TMEM255AQ5JRV8 349 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 NSUN5P2Q63ZY6 315 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 RPL7L1Q6DKI1 246 aaKnown RBP10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 PRSS54Q6PEW0 395 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 TMEM184AQ6ZMB5 413 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 TMEM182Q6ZP80 229 aaPredicted RBP10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 SLC22A24Q8N4F4 322 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 EXD3Q8N9H8 876 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 FRZBQ92765 325 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 INTS12Q96CB8 462 aaKnown RBP10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 MAP3K3Q99759 626 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 JAM3Q9BX67 310 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 TMEM59Q9BXS4 323 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 SLC35B3Q9H1N7 401 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 C11orf49Q9H6J7 331 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 PARPBPQ9NWS1 579 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 GAB2Q9UQC2 676 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 ZNF724A8MTY0 619 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 RAB27BO00194 218 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 ICOSLGO75144 302 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 H3F3AP84243 136 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 NAAAQ02083 359 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 ZNF761Q86XN6 746 aaPredicted RBP10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 RHOVQ96L33 236 aa10.26□□□□□ -0.77
CRNKL1-204ENST00000490910 RAB33BQ9H082 229 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms