RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	CSF2RB	P32927	897 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	GNAL	P38405	381 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	PSMB10	P40306	273 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	PTH2R	P49190	550 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	DHPS	P49366	369 aa	Predicted RBP	5.68	□□□□□ -1.5
FN1-223	ENST00000490833	HCCS	P53701	268 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	DSCR4	P56555	118 aa	Predicted RBP	5.68	□□□□□ -1.5
FN1-223	ENST00000490833	FBXW4	P57775	412 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	TAS2R31	P59538	309 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	NANOS3	P60323	173 aa	Known RBP	5.68	□□□□□ -1.5
FN1-223	ENST00000490833	GABRE	P78334	506 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	GK2	Q14410	553 aa	Predicted RBP	5.68	□□□□□ -1.5
FN1-223	ENST00000490833	INSL4	Q14641	139 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	POU4F3	Q15319	338 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	SF3B4	Q15427	424 aa	Known RBP eCLIP	5.68	□□□□□ -1.5	4e-7	■□□□□ 10.9
FN1-223	ENST00000490833	STK11	Q15831	433 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	CARTPT	Q16568	116 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	PNLIPRP3	Q17RR3	467 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	MS4A18	Q3C1V0	323 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	PCGF3	Q3KNV8	242 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	C2orf76	Q3KRA6	126 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	PLEKHN1	Q494U1	663 aa	Predicted RBP	5.68	□□□□□ -1.5
FN1-223	ENST00000490833	LCE1D	Q5T752	114 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	FAM27D1	Q5T7N8	215 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	HES5	Q5TA89	166 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	ZBTB37	Q5TC79	503 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	PEAR1	Q5VY43	1037 aa	Predicted RBP	5.68	□□□□□ -1.5
FN1-223	ENST00000490833	PMS2CL	Q68D20	193 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	LRFN4	Q6PJG9	635 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	ADGRE4P	Q86SQ3	457 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	TMEM17	Q86X19	198 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	ELMOD2	Q8IZ81	293 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	ARMC10	Q8N2F6	343 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	UBE2J2	Q8N2K1	259 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	5.68	□□□□□ -1.5
FN1-223	ENST00000490833	UXS1	Q8NBZ7	420 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	GJC3	Q8NFK1	279 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	SLC26A10	Q8NG04	563 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	OR13C3	Q8NGS6	347 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	ANGPTL6	Q8NI99	470 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	KCNG3	Q8TAE7	436 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	DOK4	Q8TEW6	326 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	PP6455	Q8WZ26	134 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	SNAPC3	Q92966	411 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	FAM46B	Q96A09	425 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	C8orf44	Q96CB5	159 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	RNF170	Q96K19	258 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	IP6K3	Q96PC2	410 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	TECTB	Q96PL2	329 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	CDC6	Q99741	560 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	PIGQ	Q9BRB3	760 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	URM1	Q9BTM9	101 aa	Known RBP	5.68	□□□□□ -1.5
FN1-223	ENST00000490833	ZNF700	Q9H0M5	742 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	TTYH1	Q9H313	450 aa	Predicted RBP	5.68	□□□□□ -1.5
FN1-223	ENST00000490833	SLCO1C1	Q9NYB5	712 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	GLTP	Q9NZD2	209 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	RCE1	Q9Y256	329 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	SLC5A6	Q9Y289	635 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	HSPB11	Q9Y547	144 aa		5.68	□□□□□ -1.5
FN1-223	ENST00000490833	TRAV6	A0A075B6T7	132 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	IGHV5-10-1	A0A0J9YXX1	117 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	TRBV11-1	A0A0K0K1C0	115 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833		A0A1W2PNR3	127 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	SCO2	A0A1W2PP80	73 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833		A0A1W2PPK0	400 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	SMIM30	A4D0T7	59 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	CPED1	A4D0V7	1026 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833		A8MU76	341 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	SYT7	O43581	403 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	SDC3	O75056	442 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	CA11	O75493	328 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	CTAG2	O75638	210 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	OR2A4	O95047	310 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	MAS1	P04201	325 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	IFNA6	P05013	189 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	CTSB	P07858	339 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	GSTP1	P09211	210 aa	Known RBP	5.67	□□□□□ -1.5
FN1-223	ENST00000490833	ZNF20	P17024	532 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	NFYA	P23511	347 aa	Predicted RBP	5.67	□□□□□ -1.5
FN1-223	ENST00000490833	POU3F4	P49335	361 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	ZNF84	P51523	738 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	SSR4	P51571	173 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	PSMA6	P60900	246 aa	Known RBP	5.67	□□□□□ -1.5
FN1-223	ENST00000490833	PCBD1	P61457	104 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	DGCR2	P98153	550 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	IFITM2	Q01629	132 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	MC2R	Q01718	297 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	DHODH	Q02127	395 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	CFHR1	Q03591	330 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	CD300C	Q08708	224 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	OR7A5	Q15622	319 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	HLA-B	Q31612	363 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	NRN1L	Q496H8	165 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	WDR38	Q5JTN6	314 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	C1orf189	Q5VU69	101 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	B3GNTL1	Q67FW5	361 aa	Predicted RBP	5.67	□□□□□ -1.5
FN1-223	ENST00000490833	ZNF626	Q68DY1	528 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	THOC7	Q6I9Y2	204 aa	Known RBP	5.67	□□□□□ -1.5
FN1-223	ENST00000490833	FAM166A	Q6J272	317 aa		5.67	□□□□□ -1.5
FN1-223	ENST00000490833	JMJD6	Q6NYC1	403 aa	Predicted RBP	5.67	□□□□□ -1.5

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