RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-212ENST00000490723 OR4F3Q6IEY1 312 aa2.04□□□□□ -2.08
PHC3-212ENST00000490723 TRIM40Q6P9F5 258 aa2.04□□□□□ -2.08
PHC3-212ENST00000490723 SMIM5Q71RC9 77 aa2.04□□□□□ -2.08
PHC3-212ENST00000490723 KDM3BQ7LBC6 1761 aa2.04□□□□□ -2.08
PHC3-212ENST00000490723 WDR86Q86TI4 376 aa2.04□□□□□ -2.08
PHC3-212ENST00000490723 NAV2Q8IVL1 2488 aa2.04□□□□□ -2.08
PHC3-212ENST00000490723 VSTM4Q8IW00 320 aa2.04□□□□□ -2.08
PHC3-212ENST00000490723 THRSPQ92748 146 aa2.04□□□□□ -2.08
PHC3-212ENST00000490723 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.04□□□□□ -2.08
PHC3-212ENST00000490723 DTNBP1Q96EV8 351 aa2.04□□□□□ -2.08
PHC3-212ENST00000490723 RIBC2Q9H4K1 309 aa2.04□□□□□ -2.08
PHC3-212ENST00000490723 CENPJQ9HC77 1338 aaPredicted RBP2.04□□□□□ -2.08
PHC3-212ENST00000490723 NRXN2Q9P2S2 1712 aa2.04□□□□□ -2.08
PHC3-212ENST00000490723 ARFGEF2Q9Y6D5 1785 aa2.04□□□□□ -2.08
PHC3-212ENST00000490723 LTN1O94822 1766 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 ASH1LQ9NR48 2969 aaKnown RBP2.03□□□□□ -2.08
PHC3-212ENST00000490723 DAPK1P53355 1430 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 VPS8Q8N3P4 1428 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 POLR3AO14802 1390 aaPredicted RBP2.03□□□□□ -2.08
PHC3-212ENST00000490723 EIF3AQ14152 1382 aaKnown RBP2.03□□□□□ -2.08
PHC3-212ENST00000490723 FLNBO75369 2602 aaKnown RBP2.03□□□□□ -2.08
PHC3-212ENST00000490723 IGLV3-12A0A075B6K2 115 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 K7EQM0 130 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 RAD51BO15315 384 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 KRT8P05787 483 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 IQCF3P0C7M6 154 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 NCK1P16333 377 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 AK4P27144 223 aaPredicted RBP2.03□□□□□ -2.08
PHC3-212ENST00000490723 PON3Q15166 354 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 NTM-AS1Q6ZSK4 140 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 KRTAP13-1Q8IUC0 172 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 PUSL1Q8N0Z8 303 aaKnown RBP2.03□□□□□ -2.08
PHC3-212ENST00000490723 OSR2Q8N2R0 312 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 ZNF557Q8N988 423 aaPredicted RBP2.03□□□□□ -2.08
PHC3-212ENST00000490723 FAM110BQ8TC76 370 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 TM4SF18Q96CE8 201 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 NEURL3Q96EH8 262 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 ZNF607Q96SK3 696 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 SORT1Q99523 831 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 RARRES2Q99969 163 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 RAB33BQ9H082 229 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 LIN28AQ9H9Z2 209 aaKnown RBP2.03□□□□□ -2.08
PHC3-212ENST00000490723 HMG20AQ9NP66 347 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 GPATCH2LQ9NWQ4 482 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 FAM208BQ5VWN6 2430 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 DOCK8Q8NF50 2099 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 ALPK3Q96L96 1907 aa2.03□□□□□ -2.08
PHC3-212ENST00000490723 AFDNP55196 1824 aaKnown RBP2.03□□□□□ -2.09
PHC3-212ENST00000490723 ZNF831Q5JPB2 1677 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 SSC5DA1L4H1 1573 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 CPSF1Q10570 1443 aaKnown RBP2.02□□□□□ -2.09
PHC3-212ENST00000490723 USP47Q96K76 1375 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 ANKRD30AQ9BXX3 1397 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 IGHV3-74A0A0B4J1X5 117 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 TMEM223A0PJW6 202 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 ZNF726A6NNF4 738 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 HIDE1A8MVS5 230 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 BCHEP06276 602 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 HSPA5P11021 654 aaKnown RBP2.02□□□□□ -2.09
PHC3-212ENST00000490723 CSNK1A1P48729 337 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 CX3CR1P49238 355 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 BPIFB3P59826 476 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 ELP6Q0PNE2 266 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 PDZK1Q5T2W1 519 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 TMEM179Q6ZVK1 233 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 ABHD13Q7L211 337 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 CEP112Q8N8E3 955 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 OR5D13Q8NGL4 314 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 RNF139Q8WU17 664 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 EMG1Q92979 244 aaKnown RBP2.02□□□□□ -2.09
PHC3-212ENST00000490723 L3HYPDHQ96EM0 354 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 C16orf45Q96MC5 204 aaPredicted RBP2.02□□□□□ -2.09
PHC3-212ENST00000490723 OR8B4Q96RC9 309 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 CCT7Q99832 543 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 FAIM2Q9BWQ8 316 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 HPF1Q9NWY4 346 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 ACACBO00763 2458 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 ITGB4P16144 1822 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 LAMB1P07942 1786 aa2.02□□□□□ -2.09
PHC3-212ENST00000490723 COL5A3P25940 1745 aaPredicted RBP2.02□□□□□ -2.09
PHC3-212ENST00000490723 FAM208AQ9UK61 1670 aaKnown RBP2.02□□□□□ -2.09
PHC3-212ENST00000490723 ANKRD50Q9ULJ7 1429 aa2.01□□□□□ -2.09
PHC3-212ENST00000490723 COL5A1P20908 1838 aaPredicted RBP2.01□□□□□ -2.09
PHC3-212ENST00000490723 TTC21AQ8NDW8 1320 aa2.01□□□□□ -2.09
PHC3-212ENST00000490723 KIR2DS1A0A191URI9 304 aa2.01□□□□□ -2.09
PHC3-212ENST00000490723 K7EM74 188 aa2.01□□□□□ -2.09
PHC3-212ENST00000490723 PEX11AO75192 247 aa2.01□□□□□ -2.09
PHC3-212ENST00000490723 CCNKO75909 580 aa2.01□□□□□ -2.09
PHC3-212ENST00000490723 PSMA5P28066 241 aa2.01□□□□□ -2.09
PHC3-212ENST00000490723 ATP5C1P36542 298 aaKnown RBP2.01□□□□□ -2.09
PHC3-212ENST00000490723 FDFT1P37268 417 aa2.01□□□□□ -2.09
PHC3-212ENST00000490723 CDKN2BP42772 138 aa2.01□□□□□ -2.09
PHC3-212ENST00000490723 RORCP51449 518 aa2.01□□□□□ -2.09
PHC3-212ENST00000490723 ATP1B3P54709 279 aa2.01□□□□□ -2.09
PHC3-212ENST00000490723 IRX3P78415 501 aaPredicted RBP2.01□□□□□ -2.09
PHC3-212ENST00000490723 PITPNAQ00169 270 aa2.01□□□□□ -2.09
PHC3-212ENST00000490723 LOXL1Q08397 574 aaPredicted RBP2.01□□□□□ -2.09
PHC3-212ENST00000490723 KIR2DS1Q14954 304 aa2.01□□□□□ -2.09
PHC3-212ENST00000490723 DGUOKQ16854 277 aa2.01□□□□□ -2.09
PHC3-212ENST00000490723 FAM78AQ5JUQ0 283 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms