RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 SDF2Q99470 211 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 UMAD1C9J7I0 102 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 ANGPTL7O43827 346 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 MGMTP16455 207 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 SHC1P29353 583 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 PNLIPRP2P54317 469 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 GP2P55259 537 aaKnown RBP8.11□□□□□ -1.11
LSAMP-205ENST00000490035 SLC38A9Q8NBW4 561 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 ACTR3CQ9C0K3 210 aaPredicted RBP8.11□□□□□ -1.11
LSAMP-205ENST00000490035 FN3KRPQ9HA64 309 aa8.11□□□□□ -1.11
LSAMP-205ENST00000490035 YARS2Q9Y2Z4 477 aaKnown RBP8.11□□□□□ -1.11
LSAMP-205ENST00000490035 PUS1Q9Y606 427 aaKnown RBP eCLIP8.11□□□□□ -1.11
LSAMP-205ENST00000490035 RAG2P55895 527 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 PMPCAQ10713 525 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 RAB6CQ53S08 254 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 DLEU7Q6UYE1 221 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 ZNF439Q8NDP4 499 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 NLGN4YQ8NFZ3 816 aaPredicted RBP8.1□□□□□ -1.11
LSAMP-205ENST00000490035 OR5H6Q8NGV6 325 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 MZB1Q8WU39 189 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 BCL7CQ8WUZ0 217 aaPredicted RBP8.1□□□□□ -1.11
LSAMP-205ENST00000490035 PP6455Q8WZ26 134 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 RAB6CQ9H0N0 254 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 MED16Q9Y2X0 877 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 MYO7AQ13402 2215 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 SERPINE3A8MV23 424 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 IGLV3-27P01718 113 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 PDGFAP04085 211 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 MAKP20794 623 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 MMP15P51511 669 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 LEXMQ3ZCV2 418 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 NKAIN1Q4KMZ8 207 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 PET117Q6UWS5 81 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 Q6ZNX1 250 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 TMUB2Q71RG4 321 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 SLC7A6Q92536 515 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 S1PR3Q99500 378 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 CHST6Q9GZX3 395 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 GAREM1Q9H706 876 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 FGF20Q9NP95 211 aaPredicted RBP8.1□□□□□ -1.11
LSAMP-205ENST00000490035 ZNF225Q9UK10 706 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 FOXJ3Q9UPW0 622 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 MARF1Q9Y4F3 1742 aaKnown RBP8.1□□□□□ -1.11
LSAMP-205ENST00000490035 A0A0B4J2A0 478 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 ISL1P61371 349 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 NTHL1P78549 312 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 ANKRD16Q6P6B7 361 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 ESPNLQ6ZVH7 1005 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 UBALD2Q8IYN6 164 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 GPX8Q8TED1 209 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 MBOAT4Q96T53 435 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 SHPKQ9UHJ6 478 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 SLC6A12P48065 614 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 DIO1P49895 249 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 BTN1A1Q13410 526 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 OR8G1Q15617 311 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 PHYHD1Q5SRE7 291 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 OR10R2Q8NGX6 335 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 TAAR6Q96RI8 345 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 SLAMF8Q9P0V8 285 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 TRAF3IP2O43734 574 aaPredicted RBP8.1□□□□□ -1.11
LSAMP-205ENST00000490035 SOX15O60248 233 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 PGGT1BP53609 377 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 GAB1Q13480 694 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.1□□□□□ -1.11
LSAMP-205ENST00000490035 PINX1Q96BK5 328 aaKnown RBP8.1□□□□□ -1.11
LSAMP-205ENST00000490035 OXGR1Q96P68 337 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 C11orf54Q9H0W9 315 aaPredicted RBP8.1□□□□□ -1.11
LSAMP-205ENST00000490035 ACER3Q9NUN7 267 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 TPPPO94811 219 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 TRAT1Q6PIZ9 186 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 TMEM255BQ8WV15 326 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 MS4A6EQ96DS6 147 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 SMIM3Q9BZL3 60 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 TXNIPQ9H3M7 391 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 OR2C1O95371 312 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 ADRB1P08588 477 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 PSMB6P28072 239 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 ABCD3P28288 659 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 ZNF813Q6ZN06 617 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 SYT9Q86SS6 491 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 FUNDC1Q8IVP5 155 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 CXorf58Q96LI9 332 aa8.1□□□□□ -1.11
LSAMP-205ENST00000490035 SCN8AQ9UQD0 1980 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 OR5H14A6NHG9 310 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 CALCRP30988 508 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 GLIPR1L1Q6UWM5 242 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 ANKRD33Q7Z3H0 272 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 OPALINQ96PE5 141 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 R4GMQ9 66 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 RGRP47804 291 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 PYCR3Q53H96 274 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 KLHDC1Q8N7A1 406 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 OR2G3Q8NGZ4 309 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 DUSP21Q9H596 190 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 ERVMER34-1Q9H9K5 563 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 ACTL7AQ9Y615 435 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 PSMB5P28074 263 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 SLC6A11P48066 632 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 TPMTP51580 245 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms