RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 TCP10L2B9ZVM9 353 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 K7EMT4 169 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 NDUFAB1O14561 156 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 AQP9O43315 295 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 TNFSF12O43508 249 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 PCDH7O60245 1069 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 CD48P09326 243 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 ACSM4P0C7M7 580 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 ZNF883P0CG24 379 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 PSKH1P11801 424 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 PGAM1P18669 254 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 COX5AP20674 150 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 IVDP26440 423 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 HLA-DMAP28067 261 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 CALCRP30988 508 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 HOXA9P31269 272 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 IFNA8P32881 189 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 VHLP40337 213 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 PRLHRP49683 370 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 GSK3BP49841 420 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 ACTBP60709 375 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 HERV-K104P61576 105 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 B2MP61769 119 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 ACTA2P62736 377 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 ACTG1P63261 375 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 ACTG2P63267 376 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 ACTC1P68032 377 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 ACTA1P68133 377 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 BASP1P80723 227 aaKnown RBP2.56□□□□□ -2
DEPDC1-204ENST00000489862 BNIP2Q12982 314 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 IL18R1Q13478 541 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 OR5I1Q13606 314 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 OXA1LQ15070 435 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 MAPRE2Q15555 327 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 TAB1Q15750 504 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 MLF2Q15773 248 aaPredicted RBP2.56□□□□□ -2
DEPDC1-204ENST00000489862 ZIC1Q15915 447 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 TMEM30BQ3MIR4 351 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 THEM4Q5T1C6 240 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 FHL5Q5TD97 284 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 KHDRBS2Q5VWX1 349 aaKnown RBP2.56□□□□□ -2
DEPDC1-204ENST00000489862 OR8G2PQ6IF36 304 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 UTS2BQ765I0 119 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 ABHD13Q7L211 337 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 SH2D6Q7Z4S9 175 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 METTL4Q8N3J2 472 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 JAGN1Q8N5M9 183 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 ZFP41Q8N8Y5 198 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 ACOT4Q8N9L9 421 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 ZNF485Q8NCK3 441 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 KLHDC9Q8NEP7 349 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 OR5M1Q8NGP8 315 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 RFESDQ8TAC1 157 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 FAM76AQ8TAV0 307 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 FANK1Q8TC84 345 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 PCNPQ8WW12 178 aaKnown RBP2.56□□□□□ -2
DEPDC1-204ENST00000489862 DNAJB3Q8WWF6 145 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 OR8D1Q8WZ84 308 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 NDRG1Q92597 394 aaKnown RBP2.56□□□□□ -2
DEPDC1-204ENST00000489862 FGF11Q92914 225 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 NABP1Q96AH0 204 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 CREB3L1Q96BA8 519 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 CCDC127Q96BQ5 260 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 ZNF524Q96C55 264 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 SLC25A38Q96DW6 304 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 C9orf72Q96LT7 481 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 ALKBH3Q96Q83 286 aaPredicted RBP2.56□□□□□ -2
DEPDC1-204ENST00000489862 MCHR1Q99705 422 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 LITAFQ99732 161 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 MRPL45Q9BRJ2 306 aaKnown RBP2.56□□□□□ -2
DEPDC1-204ENST00000489862 SRRQ9GZT4 340 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 SLC38A1Q9H2H9 487 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 REEP4Q9H6H4 257 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 RNF167Q9H6Y7 350 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 WDR54Q9H977 334 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 ZC4H2Q9NQZ6 224 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 B3GNT2Q9NY97 397 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 SLC25A37Q9NYZ2 338 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 EMC3Q9P0I2 261 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 WARS2Q9UGM6 360 aaKnown RBP2.56□□□□□ -2
DEPDC1-204ENST00000489862 PRELID1Q9Y255 219 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 SELENOKQ9Y6D0 94 aa2.56□□□□□ -2
DEPDC1-204ENST00000489862 DNAH12Q6ZR08 3092 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 LOC100131303A0A0U1RQF7 123 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 A0A1W2PRD5 423 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 C11orf98E9PRG8 122 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 INPP4BO15327 924 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 EMC8O43402 210 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 MBTPS2O43462 519 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 TYROBPO43914 113 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 FRAT2O75474 233 aaPredicted RBP2.55□□□□□ -2
DEPDC1-204ENST00000489862 CLDN11O75508 207 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 TRMUO75648 421 aaKnown RBP2.55□□□□□ -2
DEPDC1-204ENST00000489862 ZMPSTE24O75844 475 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 NOL4O94818 638 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 PLEKHA8P1O95397 391 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 TDP2O95551 362 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 CLDN1O95832 211 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 PRSS56P0CW18 603 aa2.55□□□□□ -2
DEPDC1-204ENST00000489862 SDC1P18827 310 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms