RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 EGFL7Q9UHF1 273 aa10.45□□□□□ -0.74
CPSF3-204ENST00000489403 NUP50Q9UKX7 468 aa10.45□□□□□ -0.74
CPSF3-204ENST00000489403 NDRG4Q9ULP0 352 aaKnown RBP10.45□□□□□ -0.74
CPSF3-204ENST00000489403 POLR3KQ9Y2Y1 108 aaPredicted RBP10.45□□□□□ -0.74
CPSF3-204ENST00000489403 HTR3EA5X5Y0 456 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 DNAJC9-AS1A6NH13 148 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 A6NIZ1 184 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 BBIP1A8MTZ0 92 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 C12orf71A8MTZ7 269 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 A8MXK9 166 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 HMGB1P1B2RPK0 211 aaPredicted RBP10.44□□□□□ -0.74
CPSF3-204ENST00000489403 F5H0A9 414 aaPredicted RBP10.44□□□□□ -0.74
CPSF3-204ENST00000489403 J3KTA2 159 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 MRASO14807 208 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 TMPRSS2O15393 492 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 KCNAB3O43448 404 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 DOK2O60496 412 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 COX5BP10606 129 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 ZNF12P17014 697 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 GSTM3P21266 225 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 KITLGP21583 273 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 GUCA1AP43080 201 aaPredicted RBP10.44□□□□□ -0.74
CPSF3-204ENST00000489403 YAP1P46937 504 aaKnown RBP10.44□□□□□ -0.74
CPSF3-204ENST00000489403 HTR5AP47898 357 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 SLC6A9P48067 706 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 RAP1BP61224 184 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 RAP1AP62834 184 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 SELENOWP63302 87 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 FOXL1Q12952 345 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 ZNF154Q13106 437 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 COQ5Q5HYK3 327 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 DOK3Q7L591 496 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 ZER1Q7Z7L7 766 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 OAFQ86UD1 273 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 NRMQ8IXM6 262 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 SPICQ8N5J4 248 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 OR2Z1Q8NG97 314 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 OR13C2Q8NGS9 318 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 ITLN1Q8WWA0 313 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 C1orf147Q96MC9 270 aaPredicted RBP10.44□□□□□ -0.74
CPSF3-204ENST00000489403 DUX5Q96PT3 197 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 SIGLEC11Q96RL6 698 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 C1QTNF5Q9BXJ0 243 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 EMC7Q9NPA0 242 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 MAN2C1Q9NTJ4 1040 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 TBCCD1Q9NVR7 557 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 RHCGQ9UBD6 479 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 ZNF69Q9UC07 566 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 INSIG2Q9Y5U4 225 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 AUP1Q9Y679 476 aa10.44□□□□□ -0.74
CPSF3-204ENST00000489403 NPPAP01160 153 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 TNFRSF1AP19438 455 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 TNFSF4P23510 183 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 PRTN3P24158 256 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 IFNA8P32881 189 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 ERFP50548 548 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 BTG1P62324 171 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 PRKCDQ05655 676 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 SCRN3Q0VDG4 424 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 KLF10Q13118 480 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 ZMYND11Q15326 602 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 PRR31Q5SQ13 230 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 RBMS3Q6XE24 437 aaKnown RBP10.43□□□□□ -0.74
CPSF3-204ENST00000489403 VASH1Q7L8A9 365 aaPredicted RBP10.43□□□□□ -0.74
CPSF3-204ENST00000489403 VTCN1Q7Z7D3 282 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 LRRC28Q86X40 367 aaPredicted RBP10.43□□□□□ -0.74
CPSF3-204ENST00000489403 OFCC1Q8IZS5 231 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 BCL6BQ8N143 479 aaPredicted RBP10.43□□□□□ -0.74
CPSF3-204ENST00000489403 KLHL36Q8N4N3 616 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 OR2T12Q8NG77 320 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 ZNF48Q96MX3 618 aaPredicted RBP10.43□□□□□ -0.74
CPSF3-204ENST00000489403 WACQ9BTA9 647 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 PLEK2Q9NYT0 353 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 IL19Q9UHD0 177 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 STARD10Q9Y365 291 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 ADAM18Q9Y3Q7 739 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 SNX13Q9Y5W8 968 aa10.43□□□□□ -0.74
CPSF3-204ENST00000489403 A0A087WUU8 490 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 ELOVL7A1L3X0 281 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 EFCAB9A8MZ26 197 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 CDC42EP2O14613 210 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 FFAR1O14842 300 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 SGCEO43556 437 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 ZNF26P17031 533 aaPredicted RBP10.42□□□□□ -0.74
CPSF3-204ENST00000489403 TUBG1P23258 451 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 SLC9A3P48764 834 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 TRAM2Q15035 370 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 ANKDD1AQ495B1 522 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 MESTQ5EB52 335 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 SHISA2Q6UWI4 295 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 FAM122BQ7Z309 247 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 SLC7A6Q92536 515 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 HAVCR1Q96D42 359 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 CMBLQ96DG6 245 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 Q96M85 177 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 OR2V2Q96R30 315 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 MRI1Q9BV20 369 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 FNDC11Q9BVV2 318 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 ZNF696Q9H7X3 374 aa10.42□□□□□ -0.74
CPSF3-204ENST00000489403 TUBG2Q9NRH3 451 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms