RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 MBNL2Q5VZF2 373 aaKnown RBP11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 DNM1P34Q6PK57 102 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 SMARCD3Q6STE5 483 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 DPY19L2P2Q6ZN68 376 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 CXXC5Q7LFL8 322 aaKnown RBP11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 ZNF101Q8IZC7 436 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 NPEPL1Q8NDH3 523 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 OR52J3Q8NH60 311 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 ABHD4Q8TB40 342 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 FANK1Q8TC84 345 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 IPCEF1Q8WWN9 437 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 RASD2Q96D21 266 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 MDFIQ99750 246 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 THTPAQ9BU02 230 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 SYT4Q9H2B2 425 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 CYSLTR2Q9NS75 346 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 ZNF275Q9NSD4 429 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 DECR2Q9NUI1 292 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 VSX1Q9NZR4 365 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 CD300AQ9UGN4 299 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 SVEP1Q4LDE5 3571 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 TPD52L2O43399 206 aaKnown RBP11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 PPIHO43447 177 aaKnown RBP11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 SGCEO43556 437 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 KHDRBS3O75525 346 aaKnown RBP11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 DNAJC8O75937 253 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 ABHD16AO95870 558 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 CTLA4P16410 223 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 TUBG1P23258 451 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 COL8A2P25067 703 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 HTR5AP47898 357 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 ZNF81P51508 661 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 CDH15P55291 814 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 PPP1CBP62140 327 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 LSM6P62312 80 aaKnown RBP11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 CCL8P80075 99 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 CCNIQ14094 377 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 SEC23BQ15437 767 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 ZNF774Q6NX45 483 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 PGM2L1Q6PCE3 622 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 THSD4Q6ZMP0 1018 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 RFPL4BQ6ZWI9 263 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 ZER1Q7Z7L7 766 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 GLB1L2Q8IW92 636 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 SLC25A40Q8TBP6 338 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 YIPF5Q969M3 257 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 SLC7A6OSQ96CW6 309 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 MARS2Q96GW9 593 aaKnown RBP11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 C1orf159Q96HA4 380 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 C4orf45Q96LM5 186 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 FUZQ9BT04 418 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 OR2J1Q9GZK6 312 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 SAP30LQ9HAJ7 183 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 EMC7Q9NPA0 242 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 TUBG2Q9NRH3 451 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 TMCC3Q9ULS5 477 aa11.79□□□□□ -0.52
SPTLC1-207ENST00000488921 B4DSR2 109 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 SOCS2O14508 198 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 IMPA2O14732 288 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 OR10H3O60404 316 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 SLC16A7O60669 478 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 RP2O75695 350 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 TXNDC12O95881 172 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 GSTM3P21266 225 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 FPR3P25089 353 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 CRABP1P29762 137 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 SLC6A6P31641 620 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 IL2RGP31785 369 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 THBS2P35442 1172 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 CRYBB2P43320 205 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 GLO1Q04760 184 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 CR1LQ2VPA4 569 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 MTX3Q5HYI7 312 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 SPATA46Q5T0L3 261 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 SPATA3Q8NHX4 192 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 KLF14Q8TD94 323 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 ELMOD3Q96FG2 381 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 COG8Q96MW5 612 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 DIRC2Q96SL1 478 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 SOX7Q9BT81 388 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 MMADHCQ9H3L0 296 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 RERGLQ9H628 205 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 IL1RAPQ9NPH3 570 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 PLEK2Q9NYT0 353 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 IL20RAQ9UHF4 553 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 ATPIF1Q9UII2 106 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 POLR1DQ9Y2S0 133 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 IER3IP1Q9Y5U9 82 aa11.78□□□□□ -0.52
SPTLC1-207ENST00000488921 IGHV1-69-2A0A0G2JMI3 117 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 CLDN25C9JDP6 229 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 GSC2O15499 205 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 RRM2P31350 389 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 MPV17P39210 176 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 MMP15P51511 669 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 DVL1P1P54792 670 aaPredicted RBP11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 FXYD6P3P58550 94 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 HFEQ30201 348 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 RFX4Q33E94 735 aa11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 VASH1Q7L8A9 365 aaPredicted RBP11.77□□□□□ -0.53
SPTLC1-207ENST00000488921 GLCCI1Q86VQ1 547 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms