RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 CEACAM3P40198 252 aa2.24□□□□□ -2.05
PTEN-204ENST00000487939 IFT88Q13099 833 aa2.24□□□□□ -2.05
PTEN-204ENST00000487939 SSX2Q16385 188 aa2.24□□□□□ -2.05
PTEN-204ENST00000487939 SAXO2Q658L1 398 aa2.24□□□□□ -2.05
PTEN-204ENST00000487939 SNX20Q7Z614 316 aa2.24□□□□□ -2.05
PTEN-204ENST00000487939 OR2A1Q8NGT9 310 aa2.24□□□□□ -2.05
PTEN-204ENST00000487939 SLC7A13Q8TCU3 470 aa2.24□□□□□ -2.05
PTEN-204ENST00000487939 C1orf198Q9H425 327 aa2.24□□□□□ -2.05
PTEN-204ENST00000487939 SLC2A8Q9NY64 477 aa2.24□□□□□ -2.05
PTEN-204ENST00000487939 PSMC3IPQ9P2W1 217 aaPredicted RBP2.24□□□□□ -2.05
PTEN-204ENST00000487939 ENOPH1Q9UHY7 261 aa2.24□□□□□ -2.05
PTEN-204ENST00000487939 STARD10Q9Y365 291 aa2.24□□□□□ -2.05
PTEN-204ENST00000487939 TNS2Q63HR2 1409 aa2.24□□□□□ -2.05
PTEN-204ENST00000487939 TUBGCP6Q96RT7 1819 aa2.24□□□□□ -2.05
PTEN-204ENST00000487939 CLPXO76031 633 aa2.23□□□□□ -2.05
PTEN-204ENST00000487939 ZNF43P17038 809 aa2.23□□□□□ -2.05
PTEN-204ENST00000487939 IL1RNP18510 177 aa2.23□□□□□ -2.05
PTEN-204ENST00000487939 RAB3AP20336 220 aa2.23□□□□□ -2.05
PTEN-204ENST00000487939 NSG1P42857 185 aa2.23□□□□□ -2.05
PTEN-204ENST00000487939 TNNT2P45379 298 aaPredicted RBP2.23□□□□□ -2.05
PTEN-204ENST00000487939 SLC25A11Q02978 314 aaKnown RBP2.23□□□□□ -2.05
PTEN-204ENST00000487939 BST1Q10588 318 aa2.23□□□□□ -2.05
PTEN-204ENST00000487939 PPP1R7Q15435 360 aa2.23□□□□□ -2.05
PTEN-204ENST00000487939 SNRNP35Q16560 246 aaKnown RBP2.23□□□□□ -2.05
PTEN-204ENST00000487939 AVPI1Q5T686 147 aa2.23□□□□□ -2.05
PTEN-204ENST00000487939 RAET1LQ5VY80 246 aa2.23□□□□□ -2.05
PTEN-204ENST00000487939 TMEM107Q6UX40 140 aa2.23□□□□□ -2.05
PTEN-204ENST00000487939 UNQ9165/PRO28630Q6UXU0 137 aa2.23□□□□□ -2.05
PTEN-204ENST00000487939 CDKL3Q8IVW4 592 aaPredicted RBP2.23□□□□□ -2.05
PTEN-204ENST00000487939 ARL6IP6Q8N6S5 226 aa2.23□□□□□ -2.05
PTEN-204ENST00000487939 ATP5SQ99766 215 aa2.23□□□□□ -2.05
PTEN-204ENST00000487939 TBL1YQ9BQ87 522 aa2.23□□□□□ -2.05
PTEN-204ENST00000487939 TIMM29Q9BSF4 260 aa2.23□□□□□ -2.05
PTEN-204ENST00000487939 YEATS2Q9ULM3 1422 aa2.23□□□□□ -2.05
PTEN-204ENST00000487939 USP47Q96K76 1375 aa2.23□□□□□ -2.05
PTEN-204ENST00000487939 GPR179Q6PRD1 2367 aa2.22□□□□□ -2.05
PTEN-204ENST00000487939 A8MUU9 505 aa2.22□□□□□ -2.05
PTEN-204ENST00000487939 SOCS1O15524 211 aa2.22□□□□□ -2.05
PTEN-204ENST00000487939 CST1P01037 141 aa2.22□□□□□ -2.05
PTEN-204ENST00000487939 CD3GP09693 182 aa2.22□□□□□ -2.05
PTEN-204ENST00000487939 ZNF688P0C7X2 276 aa2.22□□□□□ -2.05
PTEN-204ENST00000487939 HCAR3P49019 387 aa2.22□□□□□ -2.05
PTEN-204ENST00000487939 OR7A5Q15622 319 aa2.22□□□□□ -2.05
PTEN-204ENST00000487939 TMEM205Q6UW68 189 aa2.22□□□□□ -2.05
PTEN-204ENST00000487939 NIPA1Q7RTP0 329 aa2.22□□□□□ -2.05
PTEN-204ENST00000487939 WDFY1Q8IWB7 410 aa2.22□□□□□ -2.05
PTEN-204ENST00000487939 FBXL13Q8NEE6 735 aa2.22□□□□□ -2.05
PTEN-204ENST00000487939 OR9K2Q8NGE7 335 aa2.22□□□□□ -2.05
PTEN-204ENST00000487939 OR13C2Q8NGS9 318 aa2.22□□□□□ -2.05
PTEN-204ENST00000487939 PTX4Q96A99 478 aa2.22□□□□□ -2.05
PTEN-204ENST00000487939 DNAJC1Q96KC8 554 aaKnown RBP2.22□□□□□ -2.05
PTEN-204ENST00000487939 FGF20Q9NP95 211 aaPredicted RBP2.22□□□□□ -2.05
PTEN-204ENST00000487939 HIVEP2P31629 2446 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 CENPVL3A0A0U1RRI6 287 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 UBXN8O00124 270 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 CHST1O43916 411 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 KLHL41O60662 606 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 SERPINA3P01011 423 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 IGHDP01880 384 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 ZNF806P0C7X5 589 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 DCKP27707 260 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 HNRNPH3P31942 346 aaKnown RBP2.21□□□□□ -2.06
PTEN-204ENST00000487939 GPX4P36969 197 aaPredicted RBP2.21□□□□□ -2.06
PTEN-204ENST00000487939 NAA10P41227 235 aaPredicted RBP2.21□□□□□ -2.06
PTEN-204ENST00000487939 CSNK1EP49674 416 aaKnown RBP2.21□□□□□ -2.06
PTEN-204ENST00000487939 P2RX1P51575 399 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 ZNF616Q08AN1 781 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 RNASEKQ6P5S7 137 aaKnown RBP2.21□□□□□ -2.06
PTEN-204ENST00000487939 CERS6Q6ZMG9 384 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 SLC16A13Q7RTY0 426 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 NANOGNBQ7Z5D8 188 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 TMEM150AQ86TG1 271 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 LRRC52Q8N7C0 313 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 OR13G1Q8NGZ3 307 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 C17orf50Q8WW18 174 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 SLC25A46Q96AG3 418 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 ZNF488Q96MN9 340 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 HSD17B10Q99714 261 aaKnown RBP2.21□□□□□ -2.06
PTEN-204ENST00000487939 MICU1Q9BPX6 476 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 PKIBQ9C010 78 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 OR52D1Q9H346 318 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 VANGL2Q9ULK5 521 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 SIGLEC9Q9Y336 463 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 CSDC2Q9Y534 153 aaKnown RBP2.21□□□□□ -2.06
PTEN-204ENST00000487939 BRWD3Q6RI45 1802 aa2.21□□□□□ -2.06
PTEN-204ENST00000487939 ZNF233A6NK53 670 aa2.2□□□□□ -2.06
PTEN-204ENST00000487939 LRRIQ3A6PVS8 624 aaPredicted RBP2.2□□□□□ -2.06
PTEN-204ENST00000487939 H0YJW9 148 aa2.2□□□□□ -2.06
PTEN-204ENST00000487939 RAB29O14966 203 aa2.2□□□□□ -2.06
PTEN-204ENST00000487939 NUPL2O15504 423 aaKnown RBP2.2□□□□□ -2.06
PTEN-204ENST00000487939 CHST10O43529 356 aa2.2□□□□□ -2.06
PTEN-204ENST00000487939 CDC40O60508 579 aaKnown RBP eCLIP2.2□□□□□ -2.06
PTEN-204ENST00000487939 SERPINA5P05154 406 aa2.2□□□□□ -2.06
PTEN-204ENST00000487939 ZNF735P0CB33 412 aa2.2□□□□□ -2.06
PTEN-204ENST00000487939 TMED10P49755 219 aaKnown RBP2.2□□□□□ -2.06
PTEN-204ENST00000487939 RND2P52198 227 aa2.2□□□□□ -2.06
PTEN-204ENST00000487939 ATP5IP56385 69 aaPredicted RBP2.2□□□□□ -2.06
PTEN-204ENST00000487939 DDX39BQ13838 428 aaKnown RBP2.2□□□□□ -2.06
PTEN-204ENST00000487939 IGFBP7Q16270 282 aa2.2□□□□□ -2.06
PTEN-204ENST00000487939 TCEAL5Q5H9L2 206 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms