RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 FRZBQ92765 325 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 TMEM230Q96A57 120 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 ECHDC3Q96DC8 303 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 CFAP53Q96M91 514 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 WFIKKN1Q96NZ8 548 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 TGS1Q96RS0 853 aaKnown RBP2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 TMEM185BQ9H7F4 350 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 NECAP2Q9NVZ3 263 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 SAR1BQ9Y6B6 198 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 NINLQ9Y2I6 1382 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
HMGB1P36-201ENST00000487709 TET2Q6N021 2002 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 TRAV6A0A075B6T7 132 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 TMEM223A0PJW6 202 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 TMEM150BA6NC51 233 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 RAD51BO15315 384 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 NUPL2O15504 423 aaKnown RBP2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 CDH16O75309 829 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 RDH16O75452 317 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 ARG1P05089 322 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 RHOXF2BP0C7M4 288 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 OR56A5P0C7T3 313 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 PABPC4LP0CB38 370 aaKnown RBP2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 CT45A6P0DMU7 189 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 CT45A5P0DMU8 189 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 CT45A7P0DMV0 189 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 ZNF823P16415 610 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 NPY1RP25929 384 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 HCAR3P49019 387 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 RPS15P62841 145 aaKnown RBP2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 MXD1Q05195 221 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 RGNQ15493 299 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 FAM83EQ2M2I3 478 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 ORMDL2Q53FV1 153 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 CT45A1Q5HYN5 189 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 UBE2UQ5VVX9 321 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 METTL21CQ5VZV1 264 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 LRRC66Q68CR7 880 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 TWF2Q6IBS0 349 aaKnown RBP2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 MBOAT1Q6ZNC8 495 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 MRPL55Q7Z7F7 128 aaKnown RBP2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 LUZP2Q86TE4 346 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 UBALD2Q8IYN6 164 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 GTPBP8Q8N3Z3 284 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 ARRDC1Q8N5I2 433 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 TTC29Q8NA56 475 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 OR10J6PQ8NGY7 276 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 CT45A3Q8NHU0 189 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 COQ8AQ8NI60 647 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 ACMSDQ8TDX5 336 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 DCPSQ96C86 337 aaKnown RBP2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 SPIN2AQ99865 258 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 SPIN2BQ9BPZ2 258 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 CHAC1Q9BUX1 264 aa2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 CAB39Q9Y376 341 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 YTHDF2Q9Y5A9 579 aaKnown RBP2.3□□□□□ -2.04
HMGB1P36-201ENST00000487709 ARID1AO14497 2285 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 AKNAQ7Z591 1439 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 TRBV9A0A0B4J1U6 114 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 C7orf66A4D0T2 115 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 RAD51CO43502 376 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 CHMP2AO43633 222 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 HUS1O60921 280 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 ERGP11308 486 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 GGT1P19440 569 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 RAB3AP20336 220 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 P2RX1P51575 399 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 LINC00315P59091 139 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 SLC25A11Q02978 314 aaKnown RBP2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 CUL2Q13617 745 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 PIGHQ14442 188 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 STK11Q15831 433 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 SMUG1Q53HV7 270 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 XKR4Q5GH76 650 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 TCEAL5Q5H9L2 206 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 AP1ARQ63HQ0 302 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 BZW1Q7L1Q6 419 aaKnown RBP2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 BHLHA15Q7RTS1 189 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 CMTM1Q8IZ96 169 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 CBR4Q8N4T8 237 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 CHST4Q8NCG5 386 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 OR9A2Q8NGT5 310 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 APH1BQ8WW43 257 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 TCEAL3Q969E4 200 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 EEF1AKMT3Q96AZ1 226 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 XPO6Q96QU8 1125 aaKnown RBP2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 RACGAP1Q9H0H5 632 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 OR51M1Q9H341 326 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 NCOR1P1Q9H4R4 102 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 ZNF430Q9H8G1 570 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 TMEM165Q9HC07 324 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 ZNF355PQ9NSJ1 428 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 GCNT4Q9P109 453 aa2.29□□□□□ -2.04
HMGB1P36-201ENST00000487709 TRAV19A0A0A6YYK7 116 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 IGKV6-21A0A0C4DH24 114 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 H0YC42 278 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 CASQ2O14958 399 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 RBFOX2O43251 390 aaKnown RBP eCLIP2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 TSPAN13O95857 204 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms