RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 OR52W1Q6IF63 320 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 DUX4L9Q6RFH8 374 aaPredicted RBP2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 EIF3MQ7L2H7 374 aaKnown RBP2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 TMEM150AQ86TG1 271 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 CMTM1Q8IZ96 169 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 VPS8Q8N3P4 1428 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 OR2A1Q8NGT9 310 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 OR10J6PQ8NGY7 276 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 DYDC1Q8WWB3 177 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 CAPSLQ8WWF8 208 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 LZICQ8WZA0 190 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 STARD8Q92502 1023 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 NRGNQ92686 78 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 DNAJC1Q96KC8 554 aaKnown RBP2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 C11orf70Q9BRQ4 267 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 PLA2G2FQ9BZM2 168 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 NOX3Q9HBY0 568 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 MYOZ2Q9NPC6 264 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 ZNHIT6Q9NWK9 470 aaKnown RBP2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 LYARQ9NX58 379 aaKnown RBP2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 MTCH1Q9NZJ7 389 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 CCDC59Q9P031 241 aaKnown RBP2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 TBX21Q9UL17 535 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 PSG8Q9UQ74 426 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 ST3GAL6Q9Y274 331 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 KCNE3Q9Y6H6 103 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 INSRP06213 1382 aa2.21□□□□□ -2.06
SNRNP27-204ENST00000487029 CCDC88BA6NC98 1476 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 CECR2Q9BXF3 1484 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 MN1Q10571 1320 aaPredicted RBP2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 KIF27Q86VH2 1401 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 MIA2Q96PC5 1412 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 YEATS2Q9ULM3 1422 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 IGHV3-74A0A0B4J1X5 117 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 IGHV5-51A0A0C4DH38 117 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 GOLGA6L7A0A1B0GV03 622 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 WRBO00258 174 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 NUPL2O15504 423 aaKnown RBP2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 CACNG3O60359 315 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 EIF4E2O60573 245 aaKnown RBP2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 HUS1O60921 280 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 FKBP6O75344 327 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 GABARAPO95166 117 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 ERCC1P07992 297 aaPredicted RBP2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 PRPS2P11908 318 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 MAGP20916 626 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 BCKDHBP21953 392 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 CEACAM6P40199 344 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 UQCRFS1P47985 274 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 MRPL19P49406 292 aaKnown RBP2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 CSNK1EP49674 416 aaKnown RBP2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 EIF3EP60228 445 aaKnown RBP2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 STXBP1P61764 594 aaKnown RBP2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 GBE1Q04446 702 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 IFFO1Q0D2I5 559 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 ERCC8Q13216 396 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 MAB21L1Q13394 359 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 WDR43Q15061 677 aaKnown RBP eCLIP2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 OR7A5Q15622 319 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 DEFB116Q30KQ4 102 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 PGGHGQ32M88 737 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 HSDL1Q3SXM5 330 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 PTPN20Q4JDL3 420 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 TTC23LQ6PF05 361 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 TMEM220Q6QAJ8 160 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 ZFP2Q6ZN57 461 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 FAM92BQ6ZTR7 304 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 SSX9Q7RTT3 188 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 CMC1Q7Z7K0 106 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 BIVMQ86UB2 503 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 SAXO1Q8IYX7 474 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 MYOCDQ8IZQ8 938 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 GABRG1Q8N1C3 465 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 FAM86B1Q8N7N1 296 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 NOXO1Q8NFA2 376 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 C8orf44Q96CB5 159 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 SEH1LQ96EE3 360 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 ZNF396Q96N95 335 aaPredicted RBP2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 GSDMAQ96QA5 445 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 LZTS2Q9BRK4 669 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 MTG1Q9BT17 334 aaPredicted RBP2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 CHAC1Q9BUX1 264 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 SLC25A2Q9BXI2 301 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 VCXQ9H320 206 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 RPP21Q9H633 154 aaKnown RBP2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 UVRAGQ9P2Y5 699 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 SLC17A4Q9Y2C5 497 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 TMED5Q9Y3A6 229 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 BRD4O60885 1362 aaPredicted RBP2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 MTUS2Q5JR59 1369 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 PLEKHG2Q9H7P9 1386 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 WDR97A6NE52 1622 aa2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 POLA1P09884 1462 aaPredicted RBP2.2□□□□□ -2.06
SNRNP27-204ENST00000487029 ARHGAP21Q5T5U3 1957 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 SETD5Q9C0A6 1442 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 ZMYM4Q5VZL5 1548 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 SERTM2A0A1B0GWG4 89 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 ANKRD63C9JTQ0 380 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 SCAMP2O15127 329 aaKnown RBP2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 CLDN11O75508 207 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms