RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 RAB3CQ96E17 227 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 MARS2Q96GW9 593 aaKnown RBP9.6□□□□□ -0.87
CCDC171-208ENST00000486641 OR5B2Q96R09 309 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 GAS2L1Q99501 681 aaPredicted RBP9.6□□□□□ -0.87
CCDC171-208ENST00000486641 TRIM2Q9C040 744 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 CAPN10Q9HC96 672 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 MKKSQ9NPJ1 570 aaPredicted RBP9.6□□□□□ -0.87
CCDC171-208ENST00000486641 DUSP22Q9NRW4 184 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 KPTNQ9Y664 436 aa9.6□□□□□ -0.87
CCDC171-208ENST00000486641 MRPS18BQ9Y676 258 aaKnown RBP9.6□□□□□ -0.87
CCDC171-208ENST00000486641 CD63P08962 238 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 OR8U9P0C7N5 309 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 ADRB3P13945 408 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 CPMP14384 443 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 HTR2CP28335 458 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 MAP3K8P41279 467 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 LSSP48449 732 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 ULK3Q6PHR2 472 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 FRMD1Q8N878 549 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 OR2L3Q8NG85 312 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 OR8U1Q8NH10 309 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 SLAMF9Q96A28 289 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 COX14Q96I36 57 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 DCBLD2Q96PD2 775 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 MESP1Q9BRJ9 268 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 NRSN2Q9GZP1 204 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 OPA3Q9H6K4 179 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 WDR76Q9H967 626 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 SPHK2Q9NRA0 654 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 DNAJB12Q9NXW2 375 aaKnown RBP9.59□□□□□ -0.87
CCDC171-208ENST00000486641 CGGBP1Q9UFW8 167 aaPredicted RBP9.59□□□□□ -0.87
CCDC171-208ENST00000486641 ZNF107Q9UII5 783 aaPredicted RBP9.59□□□□□ -0.87
CCDC171-208ENST00000486641 METTL21EPA6NDL7 271 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 WIPF3A6NGB9 483 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 BLOC1S5-TXNDC5H3BN57 136 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 M0R036 132 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 HOXA2O43364 376 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 FGF19O95750 216 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 GPANK1O95872 356 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 HOXB5P09067 269 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 HOXA5P20719 270 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 CX3CR1P49238 355 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 RASGEF1BQ0VAM2 473 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 RPL7L1Q6DKI1 246 aaKnown RBP9.59□□□□□ -0.87
CCDC171-208ENST00000486641 AWAT2Q6E213 333 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 FAHD2BQ6P2I3 314 aaPredicted RBP9.59□□□□□ -0.87
CCDC171-208ENST00000486641 LRRC69Q6ZNQ3 347 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 SSX9Q7RTT3 188 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 DPY19L4Q7Z388 723 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 ANGPTL5Q86XS5 388 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 CDRT4Q8N9R6 151 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 MFSD9Q8NBP5 474 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 OR6N2Q8NGY6 317 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 ZNF563Q8TA94 476 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 MALSU1Q96EH3 234 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 FAHD2AQ96GK7 314 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 C4orf45Q96LM5 186 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 AMELYQ99218 206 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 SLC5A7Q9GZV3 580 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 CHRDQ9H2X0 955 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 TAF9BQ9HBM6 251 aa9.59□□□□□ -0.87
CCDC171-208ENST00000486641 H7C1C5 153 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 NDUFB7P17568 137 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 ALOX5APP20292 161 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 PEBP1P30086 187 aaKnown RBP9.58□□□□□ -0.88
CCDC171-208ENST00000486641 ACTR1BP42025 376 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 SULT1A2P50226 295 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 LCN6P62502 163 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 CYCSP99999 105 aaKnown RBP9.58□□□□□ -0.88
CCDC171-208ENST00000486641 RUNX2Q13950 521 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 CLINT1Q14677 625 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 ISXQ2M1V0 245 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 OTPQ5XKR4 325 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 PRSS54Q6PEW0 395 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 ANKRD33Q7Z3H0 272 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 FJX1Q86VR8 437 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 RCBTB1Q8NDN9 531 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 OR2L8Q8NGY9 312 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 AKR7LQ8NHP1 331 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 RNF128Q8TEB7 428 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 ASB17Q8WXJ9 295 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 STACQ99469 402 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 RGCCQ9H4X1 137 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 SLC22A13Q9Y226 551 aa9.58□□□□□ -0.88
CCDC171-208ENST00000486641 DCDC2BA2VCK2 349 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 ADAP1O75689 374 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 IFNA2P01563 188 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 PCCBP05166 539 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 LYL1P12980 280 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 SELPP16109 830 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 CST5P28325 142 aaPredicted RBP9.57□□□□□ -0.88
CCDC171-208ENST00000486641 RIDAP52758 137 aaKnown RBP9.57□□□□□ -0.88
CCDC171-208ENST00000486641 SLC25A1P53007 311 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 FAM53BQ14153 422 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 EBPQ15125 230 aaKnown RBP9.57□□□□□ -0.88
CCDC171-208ENST00000486641 HMGN3Q15651 99 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 ZNF239Q16600 458 aaKnown RBP9.57□□□□□ -0.88
CCDC171-208ENST00000486641 TMEM225Q6GV28 225 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.57□□□□□ -0.88
CCDC171-208ENST00000486641 TRAPPC6BQ86SZ2 158 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms