RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 OR51L1Q8NGJ5 315 aa13.96□□□□□ -0.17
DDR1-246ENST00000485023 OR1J1Q8NGS3 322 aa13.96□□□□□ -0.17
DDR1-246ENST00000485023 ABHD4Q8TB40 342 aa13.96□□□□□ -0.17
DDR1-246ENST00000485023 TEX47Q8TBZ9 253 aa13.96□□□□□ -0.17
DDR1-246ENST00000485023 COX4I2Q96KJ9 171 aa13.96□□□□□ -0.17
DDR1-246ENST00000485023 POM121L2Q96KW2 1035 aa13.96□□□□□ -0.17
DDR1-246ENST00000485023 DOK1Q99704 481 aa13.96□□□□□ -0.17
DDR1-246ENST00000485023 PLEK2Q9NYT0 353 aa13.96□□□□□ -0.17
DDR1-246ENST00000485023 FKBP7Q9Y680 259 aa13.96□□□□□ -0.17
DDR1-246ENST00000485023 FLNAP21333 2647 aaKnown RBP13.96□□□□□ -0.17
DDR1-246ENST00000485023 IGHV4-30-2A0A087WSY4 118 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 ARRDC5A6NEK1 342 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 SGCEO43556 437 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 CLPTM1O96005 669 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 HOXB6P17509 224 aaKnown RBP13.95□□□□□ -0.18
DDR1-246ENST00000485023 PPOXP50336 477 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 EFNA4P52798 201 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 UCP2P55851 309 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 CRMP1Q14194 572 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 GK3PQ14409 553 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 CORO6Q6QEF8 472 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 CLEC2AQ6UVW9 174 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 RFPL4BQ6ZWI9 263 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 VASH1Q7L8A9 365 aaPredicted RBP13.95□□□□□ -0.18
DDR1-246ENST00000485023 LINC00346Q8IVM7 164 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 ATG16L2Q8NAA4 619 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 PROKR2Q8NFJ6 384 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 OR10H5Q8NGA6 315 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 SLC7A6Q92536 515 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 SNX18Q96RF0 628 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 RACGAP1Q9H0H5 632 aa13.95□□□□□ -0.18
DDR1-246ENST00000485023 MMADHCQ9H3L0 296 aaPredicted RBP13.95□□□□□ -0.18
DDR1-246ENST00000485023 EIF3KQ9UBQ5 218 aaKnown RBP13.95□□□□□ -0.18
DDR1-246ENST00000485023 ARID1AO14497 2285 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 M0R233 179 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 RER1O15258 196 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 GYPBP06028 91 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 RAD52P43351 418 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 TEKQ02763 1124 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 NKPD1Q17RQ9 610 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 LYPD4Q6UWN0 246 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 SYT9Q86SS6 491 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 LNX2Q8N448 690 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 SLC26A10Q8NG04 563 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 ZNRF4Q8WWF5 429 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 UTP4Q969X6 686 aaKnown RBP13.94□□□□□ -0.18
DDR1-246ENST00000485023 OTULINQ96BN8 352 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 BCL2L14Q9BZR8 327 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 ZNF556Q9HAH1 456 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 NTN4Q9HB63 628 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 KIF17Q9P2E2 1029 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 REV1Q9UBZ9 1251 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 NDRG4Q9ULP0 352 aaKnown RBP13.94□□□□□ -0.18
DDR1-246ENST00000485023 LHFPL6Q9Y693 200 aa13.94□□□□□ -0.18
DDR1-246ENST00000485023 TVP23AA6NH52 213 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 RIIAD1A6NNX1 92 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 SYNGR3O43761 229 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 DEAF1O75398 565 aaPredicted RBP13.93□□□□□ -0.18
DDR1-246ENST00000485023 F12P00748 615 aaPredicted RBP13.93□□□□□ -0.18
DDR1-246ENST00000485023 TFP02787 698 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 CLUP10909 449 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 NAT2P11245 290 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 FOSL1P15407 271 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 PCSK6P29122 969 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 RPS27P42677 84 aaKnown RBP13.93□□□□□ -0.18
DDR1-246ENST00000485023 ARHGDIAP52565 204 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 KLF3P57682 345 aaPredicted RBP13.93□□□□□ -0.18
DDR1-246ENST00000485023 LSM6P62312 80 aaKnown RBP13.93□□□□□ -0.18
DDR1-246ENST00000485023 KCNMB1Q16558 191 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 CCDC92Q53HC0 331 aaPredicted RBP13.93□□□□□ -0.18
DDR1-246ENST00000485023 TMEM154Q6P9G4 183 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 DNM1P46Q6ZS02 220 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 ASRGL1Q7L266 308 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 ZBTB46Q86UZ6 589 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 OR2T4Q8NH00 348 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 SYNPRQ8TBG9 265 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 SLC25A40Q8TBP6 338 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 RHNO1Q9BSD3 238 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 REG4Q9BYZ8 158 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 RAB1BQ9H0U4 201 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 MED20Q9H944 212 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 TAAR3PQ9P1P4 343 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 KLHL21Q9UJP4 597 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 BAIAP2Q9UQB8 552 aa13.93□□□□□ -0.18
DDR1-246ENST00000485023 FAM183AA6NL82 134 aa13.92□□□□□ -0.18
DDR1-246ENST00000485023 EBAG9O00559 213 aa13.92□□□□□ -0.18
DDR1-246ENST00000485023 ABHD16AO95870 558 aa13.92□□□□□ -0.18
DDR1-246ENST00000485023 NGFP01138 241 aa13.92□□□□□ -0.18
DDR1-246ENST00000485023 IFNGP01579 166 aa13.92□□□□□ -0.18
DDR1-246ENST00000485023 ERCC1P07992 297 aaPredicted RBP13.92□□□□□ -0.18
DDR1-246ENST00000485023 DBHP09172 617 aa13.92□□□□□ -0.18
DDR1-246ENST00000485023 ZNF3P17036 446 aa13.92□□□□□ -0.18
DDR1-246ENST00000485023 MPV17P39210 176 aa13.92□□□□□ -0.18
DDR1-246ENST00000485023 PPP1CBP62140 327 aa13.92□□□□□ -0.18
DDR1-246ENST00000485023 COX10Q12887 443 aa13.92□□□□□ -0.18
DDR1-246ENST00000485023 ZNF362Q5T0B9 420 aaPredicted RBP13.92□□□□□ -0.18
DDR1-246ENST00000485023 SHQ1Q6PI26 577 aaKnown RBP13.92□□□□□ -0.18
DDR1-246ENST00000485023 CLEC9AQ6UXN8 241 aa13.92□□□□□ -0.18
DDR1-246ENST00000485023 CD300LDQ6UXZ3 194 aa13.92□□□□□ -0.18
DDR1-246ENST00000485023 CFAP77Q6ZQR2 320 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms