RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 SCN2AQ99250 2005 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 A0A1W2PRF3 423 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 A0A1W2PRM7 423 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 NCBP2LA6PVI3 153 aaKnown RBP3.23□□□□□ -1.89
VPS13A-211ENST00000484581 RRP8O43159 456 aaKnown RBP3.23□□□□□ -1.89
VPS13A-211ENST00000484581 SLC19A2O60779 497 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 MPDU1O75352 247 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 SUPT7LO94864 414 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 TDP2O95551 362 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 OXTP01178 125 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 SMIM10L1P0DMW3 83 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 GFAPP14136 432 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 F2RP25116 425 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 GPR4P46093 362 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 CLDN6P56747 220 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 PSMC5P62195 406 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 IGLV3-21P80748 117 aaPredicted RBP3.23□□□□□ -1.89
VPS13A-211ENST00000484581 EIF4G1Q04637 1599 aaKnown RBP3.23□□□□□ -1.89
VPS13A-211ENST00000484581 VAMP3Q15836 100 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 ZBED5Q49AG3 693 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 C9orf129Q5T035 196 aaKnown RBP3.23□□□□□ -1.89
VPS13A-211ENST00000484581 ANKRD22Q5VYY1 191 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 MBOAT2Q6ZWT7 520 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 VKORC1L1Q8N0U8 176 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 ACER1Q8TDN7 264 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 ASZ1Q8WWH4 475 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 NDRG1Q92597 394 aaKnown RBP3.23□□□□□ -1.89
VPS13A-211ENST00000484581 TMEM230Q96A57 120 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 RPEQ96AT9 228 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 FAM3DQ96BQ1 224 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 AURKBQ96GD4 344 aaPredicted RBP3.23□□□□□ -1.89
VPS13A-211ENST00000484581 C16orf74Q96GX8 76 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 SMIM10Q96HG1 83 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 B3GALT6Q96L58 329 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 CALN1Q9BXU9 219 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 KIR3DX1Q9H7L2 352 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 CSNK1G1Q9HCP0 422 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 ADAM22Q9P0K1 906 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 ZNF629Q9UEG4 869 aaPredicted RBP3.23□□□□□ -1.89
VPS13A-211ENST00000484581 ST3GAL6Q9Y274 331 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 CEMIPQ8WUJ3 1361 aa3.23□□□□□ -1.89
VPS13A-211ENST00000484581 H3BN98 237 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 PEX7O00628 323 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 XKRYO14609 159 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 ERI3O43414 337 aaKnown RBP3.22□□□□□ -1.89
VPS13A-211ENST00000484581 GMDSO60547 372 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 NPIPB7O75200 414 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 HPRT1P00492 218 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 CCL2P13500 99 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 CSNK2A2P19784 350 aaPredicted RBP3.22□□□□□ -1.89
VPS13A-211ENST00000484581 IVDP26440 423 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 HTR1EP28566 365 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 SLC26A3P40879 764 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 NOVP48745 357 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 SEMG2Q02383 582 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 ORC2Q13416 577 aaPredicted RBP3.22□□□□□ -1.89
VPS13A-211ENST00000484581 PRPSAP1Q14558 356 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 C5orf64Q2M2E5 130 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 SLC25A30Q5SVS4 291 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 C6orf183Q5T699 404 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 PRMT9Q6P2P2 845 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 WDR82Q6UXN9 313 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 OR2W3Q7Z3T1 314 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 OAFQ86UD1 273 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 HORMAD1Q86X24 394 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 OR10J6PQ8NGY7 276 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 APH1BQ8WW43 257 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 CACNG8Q8WXS5 425 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 LRRC58Q96CX6 371 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 MAGEB18Q96M61 343 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 GLT1D1Q96MS3 346 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 TSSK3Q96PN8 268 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 FOXC2Q99958 501 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 RASL11BQ9BPW5 248 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 CHID1Q9BWS9 393 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 NAA50Q9GZZ1 169 aaKnown RBP3.22□□□□□ -1.89
VPS13A-211ENST00000484581 RAB1BQ9H0U4 201 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 TMEM9BQ9NQ34 198 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 ADA2Q9NZK5 511 aa3.22□□□□□ -1.89
VPS13A-211ENST00000484581 ZMAT5Q9UDW3 170 aaKnown RBP3.22□□□□□ -1.89
VPS13A-211ENST00000484581 RBMX2Q9Y388 322 aaKnown RBP3.22□□□□□ -1.89
VPS13A-211ENST00000484581 GAKO14976 1311 aa3.21□□□□□ -1.89
VPS13A-211ENST00000484581 PDZK1P1A8MUH7 402 aa3.21□□□□□ -1.9
VPS13A-211ENST00000484581 LCA5LO95447 670 aa3.21□□□□□ -1.9
VPS13A-211ENST00000484581 GIPP09681 153 aaPredicted RBP3.21□□□□□ -1.9
VPS13A-211ENST00000484581 GGT1P19440 569 aa3.21□□□□□ -1.9
VPS13A-211ENST00000484581 RND2P52198 227 aa3.21□□□□□ -1.9
VPS13A-211ENST00000484581 REG3AQ06141 175 aa3.21□□□□□ -1.9
VPS13A-211ENST00000484581 UNC119Q13432 240 aa3.21□□□□□ -1.9
VPS13A-211ENST00000484581 SLC39A6Q13433 755 aa3.21□□□□□ -1.9
VPS13A-211ENST00000484581 QPRTQ15274 297 aa3.21□□□□□ -1.9
VPS13A-211ENST00000484581 RFX4Q33E94 735 aa3.21□□□□□ -1.9
VPS13A-211ENST00000484581 CCDC14Q49A88 953 aa3.21□□□□□ -1.9
VPS13A-211ENST00000484581 PAGE3Q5JUK9 113 aa3.21□□□□□ -1.9
VPS13A-211ENST00000484581 FHL5Q5TD97 284 aa3.21□□□□□ -1.9
VPS13A-211ENST00000484581 NPSR1Q6W5P4 371 aa3.21□□□□□ -1.9
VPS13A-211ENST00000484581 IL34Q6ZMJ4 242 aa3.21□□□□□ -1.9
VPS13A-211ENST00000484581 TMPRSS11AQ6ZMR5 421 aa3.21□□□□□ -1.9
VPS13A-211ENST00000484581 TEX43Q6ZNM6 134 aa3.21□□□□□ -1.9
VPS13A-211ENST00000484581 PID1Q7Z2X4 250 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms