RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 PPP1R2P9O14990 202 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 SNNO75324 88 aaPredicted RBP1.23□□□□□ -2.21
SCAF11-207ENST00000484275 CD3GP09693 182 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 ZNF688P0C7X2 276 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 GPR89BP0CG08 455 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 CASP14P31944 242 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 ACAA2P42765 397 aaKnown RBP1.23□□□□□ -2.21
SCAF11-207ENST00000484275 GPX6P59796 221 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 BPIFB3P59826 476 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 CDK5Q00535 292 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 FGL1Q08830 312 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 RBMY1FQ15415 496 aaKnown RBP1.23□□□□□ -2.21
SCAF11-207ENST00000484275 CCDC92Q53HC0 331 aaPredicted RBP1.23□□□□□ -2.21
SCAF11-207ENST00000484275 SMARCD3Q6STE5 483 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 CASP12Q6UXS9 341 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 SNX20Q7Z614 316 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 ZSCAN30Q86W11 494 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 GPATCH11Q8N954 259 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 FAM83FQ8NEG4 500 aaPredicted RBP1.23□□□□□ -2.21
SCAF11-207ENST00000484275 TTLQ8NG68 377 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 OR1L4Q8NGR5 311 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 RLN3Q8WXF3 142 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 TCEANC2Q96MN5 208 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 SERPINB12Q96P63 405 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 IP6K3Q96PC2 410 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 RHOXF2Q9BQY4 288 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 TM2D3Q9BRN9 247 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 EPS15L1Q9UBC2 864 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 HYOU1Q9Y4L1 999 aa1.23□□□□□ -2.21
SCAF11-207ENST00000484275 PRRC2BQ5JSZ5 2229 aaKnown RBP1.23□□□□□ -2.21
SCAF11-207ENST00000484275 COL11A1P12107 1806 aaPredicted RBP1.22□□□□□ -2.21
SCAF11-207ENST00000484275 IGLV1-36A0A0B4J1U3 117 aa1.22□□□□□ -2.21
SCAF11-207ENST00000484275 TIMM8AO60220 97 aaPredicted RBP1.22□□□□□ -2.21
SCAF11-207ENST00000484275 CCNB1P14635 433 aa1.22□□□□□ -2.21
SCAF11-207ENST00000484275 UBE2NP61088 152 aaKnown RBP1.22□□□□□ -2.21
SCAF11-207ENST00000484275 ECH1Q13011 328 aa1.22□□□□□ -2.21
SCAF11-207ENST00000484275 THEM4Q5T1C6 240 aa1.22□□□□□ -2.21
SCAF11-207ENST00000484275 ADNP2Q6IQ32 1131 aa1.22□□□□□ -2.21
SCAF11-207ENST00000484275 LRRC74BQ6ZQY2 392 aa1.22□□□□□ -2.21
SCAF11-207ENST00000484275 GMCL1P1Q8NEA9 526 aa1.22□□□□□ -2.21
SCAF11-207ENST00000484275 OR1L6Q8NGR2 347 aa1.22□□□□□ -2.21
SCAF11-207ENST00000484275 THRSPQ92748 146 aa1.22□□□□□ -2.21
SCAF11-207ENST00000484275 HGDQ93099 445 aa1.22□□□□□ -2.21
SCAF11-207ENST00000484275 NTAN1Q96AB6 310 aa1.22□□□□□ -2.21
SCAF11-207ENST00000484275 DNAJC1Q96KC8 554 aaKnown RBP1.22□□□□□ -2.21
SCAF11-207ENST00000484275 RBBP8Q99708 897 aa1.22□□□□□ -2.21
SCAF11-207ENST00000484275 TMEM43Q9BTV4 400 aa1.22□□□□□ -2.21
SCAF11-207ENST00000484275 CACNA1GO43497 2377 aa1.21□□□□□ -2.22
SCAF11-207ENST00000484275 GOLGA8SH3BPF8 625 aa1.21□□□□□ -2.22
SCAF11-207ENST00000484275 HAS3O00219 553 aa1.21□□□□□ -2.22
SCAF11-207ENST00000484275 B3GALNT1O75752 331 aa1.21□□□□□ -2.22
SCAF11-207ENST00000484275 CNMDO75829 334 aa1.21□□□□□ -2.22
SCAF11-207ENST00000484275 PTMAP06454 111 aaKnown RBP1.21□□□□□ -2.22
SCAF11-207ENST00000484275 SYKP43405 635 aa1.21□□□□□ -2.22
SCAF11-207ENST00000484275 PPP1CBP62140 327 aa1.21□□□□□ -2.22
SCAF11-207ENST00000484275 TNFRSF9Q07011 255 aa1.21□□□□□ -2.22
SCAF11-207ENST00000484275 AVPI1Q5T686 147 aa1.21□□□□□ -2.22
SCAF11-207ENST00000484275 C16orf47Q6ZP98 133 aaPredicted RBP1.21□□□□□ -2.22
SCAF11-207ENST00000484275 SLC35G3Q8N808 338 aa1.21□□□□□ -2.22
SCAF11-207ENST00000484275 OR4F6Q8NGB9 312 aa1.21□□□□□ -2.22
SCAF11-207ENST00000484275 SEH1LQ96EE3 360 aa1.21□□□□□ -2.22
SCAF11-207ENST00000484275 ZFP3Q96NJ6 502 aa1.21□□□□□ -2.22
SCAF11-207ENST00000484275 ZNF317Q96PQ6 595 aaPredicted RBP1.21□□□□□ -2.22
SCAF11-207ENST00000484275 GGTLC1Q9BX51 225 aa1.21□□□□□ -2.22
SCAF11-207ENST00000484275 C21orf62Q9NYP8 219 aa1.21□□□□□ -2.22
SCAF11-207ENST00000484275 ING4Q9UNL4 249 aa1.21□□□□□ -2.22
SCAF11-207ENST00000484275 NPTNQ9Y639 398 aa1.21□□□□□ -2.22
SCAF11-207ENST00000484275 A0A1W2PPE3 182 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 CHST10O43529 356 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 SOX15O60248 233 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 PEX11AO75192 247 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 KLHL2O95198 593 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 CRYGBP07316 175 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 ATP1B2P14415 290 aaPredicted RBP1.2□□□□□ -2.22
SCAF11-207ENST00000484275 ETS2P15036 469 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 CDKN2DP55273 166 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 KRTAP12-1P59990 96 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 SLC25A11Q02978 314 aaKnown RBP1.2□□□□□ -2.22
SCAF11-207ENST00000484275 TWF1Q12792 350 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 GK3PQ14409 553 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 EXOC3L2Q2M3D2 409 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 FAM222AQ5U5X8 452 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 SLC25A24Q6NUK1 477 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 OR10AD1Q8NGE0 317 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 OR1S2Q8NGQ3 325 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 GALNT14Q96FL9 552 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 CNDP1Q96KN2 507 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 C16orf45Q96MC5 204 aaPredicted RBP1.2□□□□□ -2.22
SCAF11-207ENST00000484275 HSD17B10Q99714 261 aaKnown RBP1.2□□□□□ -2.22
SCAF11-207ENST00000484275 ZSCAN16Q9H4T2 348 aaPredicted RBP1.2□□□□□ -2.22
SCAF11-207ENST00000484275 EDA2RQ9HAV5 297 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 EXOSC4Q9NPD3 245 aaKnown RBP1.2□□□□□ -2.22
SCAF11-207ENST00000484275 HPF1Q9NWY4 346 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 PEX16Q9Y5Y5 336 aa1.2□□□□□ -2.22
SCAF11-207ENST00000484275 SNTNA6NMZ2 147 aa1.19□□□□□ -2.22
SCAF11-207ENST00000484275 PSTPIP1O43586 416 aa1.19□□□□□ -2.22
SCAF11-207ENST00000484275 NOL3O60936 208 aaKnown RBP1.19□□□□□ -2.22
SCAF11-207ENST00000484275 TMEM50AO95807 157 aa1.19□□□□□ -2.22
SCAF11-207ENST00000484275 NDUFB10O96000 172 aa1.19□□□□□ -2.22
SCAF11-207ENST00000484275 DBTP11182 482 aaKnown RBP1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms