RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 CD53P19397 219 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 CTSSP25774 331 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 NTF4P34130 210 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 OPRM1P35372 400 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 SCRN3Q0VDG4 424 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 AQP6Q13520 282 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 EIF2B1Q14232 305 aaKnown RBP12.3□□□□□ -0.44
SMAD9-204ENST00000483941 RAB39AQ14964 217 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 CEACAM16Q2WEN9 425 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 CCDC58Q4VC31 144 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 ARMCX4Q5H9R4 360 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 C1QTNF12Q5T7M4 302 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 NUFIP2Q7Z417 695 aaKnown RBP12.3□□□□□ -0.44
SMAD9-204ENST00000483941 DOLPP1Q86YN1 238 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.3□□□□□ -0.44
SMAD9-204ENST00000483941 OR13F1Q8NGS4 319 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 GATAD2BQ8WXI9 593 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 UFD1Q92890 307 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 ALKBH3Q96Q83 286 aaPredicted RBP12.3□□□□□ -0.44
SMAD9-204ENST00000483941 PIGMQ9H3S5 423 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 NIPAL2Q9H841 368 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 PLSCR4Q9NRQ2 329 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 SLC7A10Q9NS82 523 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 TMEM38BQ9NVV0 291 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 CYB5R1Q9UHQ9 305 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 UGT2A1Q9Y4X1 527 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 KIAA1549Q9HCM3 1950 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 ALPK2Q86TB3 2170 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 CCDC168Q8NDH2 2452 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 IGKV1D-43A0A0B4J1Z2 117 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 E9PLN8 166 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 J3QLW9 94 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 CCRL2O00421 344 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 INMTO95050 263 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 APOC1P02654 83 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 CD8BP10966 210 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 HOXB1P14653 301 aaPredicted RBP12.29□□□□□ -0.44
SMAD9-204ENST00000483941 ZNF19P17023 458 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 PAX7P23759 505 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 CEACAM8P31997 349 aaPredicted RBP12.29□□□□□ -0.44
SMAD9-204ENST00000483941 KIR2DL2P43627 348 aaPredicted RBP12.29□□□□□ -0.44
SMAD9-204ENST00000483941 ROM1Q03395 351 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 ZNF85Q03923 595 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 FAPQ12884 760 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 ECH1Q13011 328 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 TRAM1Q15629 374 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 SLC36A2Q495M3 483 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 PHYHD1Q5SRE7 291 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 Q6ZT83 130 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 BEND4Q6ZU67 534 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 ZNF627Q7L945 461 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 KRT77Q7Z794 578 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.29□□□□□ -0.44
SMAD9-204ENST00000483941 WDFY1Q8IWB7 410 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 ZNF679Q8IYX0 411 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 OR52N5Q8NH56 324 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 SPRYD4Q8WW59 207 aaPredicted RBP12.29□□□□□ -0.44
SMAD9-204ENST00000483941 NANOS1Q8WY41 292 aaKnown RBP12.29□□□□□ -0.44
SMAD9-204ENST00000483941 VKORC1Q9BQB6 163 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 BCL7BQ9BQE9 202 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 C12orf49Q9H741 205 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 GNG8Q9UK08 70 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 IKZF2Q9UKS7 526 aa12.29□□□□□ -0.44
SMAD9-204ENST00000483941 LSM2Q9Y333 95 aaKnown RBP12.29□□□□□ -0.44
SMAD9-204ENST00000483941 MED13LQ71F56 2210 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 ARPC4-TTLL3A0A0A6YYG9 625 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 ZNF701M0R085 212 aaPredicted RBP12.28□□□□□ -0.44
SMAD9-204ENST00000483941 MPZL1O95297 269 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 LCKP06239 509 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 PSMA1P25786 263 aaKnown RBP12.28□□□□□ -0.44
SMAD9-204ENST00000483941 CDAP32320 146 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 DCTDP32321 178 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 TGM4P49221 684 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 RIDAP52758 137 aaKnown RBP12.28□□□□□ -0.44
SMAD9-204ENST00000483941 GRB2P62993 217 aaKnown RBP12.28□□□□□ -0.44
SMAD9-204ENST00000483941 SIRPAP78324 504 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 P2RY6Q15077 328 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 TAF13Q15543 124 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 OR2G6Q5TZ20 316 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 RTL6Q6ICC9 239 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 OR7E24Q6IFN5 339 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 ANKRD16Q6P6B7 361 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 KLHL24Q6TFL4 600 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 TFAP2EQ6VUC0 442 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 ZNF813Q6ZN06 617 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 VASH1Q7L8A9 365 aaPredicted RBP12.28□□□□□ -0.44
SMAD9-204ENST00000483941 SLC16A14Q7RTX9 510 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 DCXRQ7Z4W1 244 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 SATL1Q86VE3 508 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 GCNT2Q8N0V5 402 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 SLC22A24Q8N4F4 322 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 YIPF7Q8N8F6 280 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 ZNF420Q8TAQ5 688 aaPredicted RBP12.28□□□□□ -0.44
SMAD9-204ENST00000483941 C4orf36Q96KX1 117 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 OR8B4Q96RC9 309 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 USB1Q9BQ65 265 aaKnown RBP12.28□□□□□ -0.44
SMAD9-204ENST00000483941 ZNF649Q9BS31 505 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 ABHD6Q9BV23 337 aa12.28□□□□□ -0.44
SMAD9-204ENST00000483941 MOV10Q9HCE1 1003 aaKnown RBP12.28□□□□□ -0.44
SMAD9-204ENST00000483941 GALNT8Q9NY28 637 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms