RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 ALG12Q9BV10 488 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 CCDC134Q9H6E4 229 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 NTN4Q9HB63 628 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 PATZ1Q9HBE1 687 aaKnown RBP11.7□□□□□ -0.54
VARS-226ENST00000483275 CYSLTR2Q9NS75 346 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 ZDHHC8Q9ULC8 765 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 HIF3AQ9Y2N7 669 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 ADAM18Q9Y3Q7 739 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 TIMM10BQ9Y5J6 103 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 WNK1Q9H4A3 2382 aa11.7□□□□□ -0.54
VARS-226ENST00000483275 IMPA2O14732 288 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 DOK2O60496 412 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 GPANK1O95872 356 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 MSR1P21757 451 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 SLC6A9P48067 706 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 ARHGDIAP52565 204 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 PRSS12P56730 875 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 BTG1P62324 171 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 FOXL1Q12952 345 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 CDK5R2Q13319 367 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 FHL1Q13642 323 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 TUSC1Q2TAM9 212 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 CYBRD1Q53TN4 286 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 ZMAT1Q5H9K5 638 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 LEG1Q6P5S2 330 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 SHISA2Q6UWI4 295 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 ALDH16A1Q8IZ83 802 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 KLHL36Q8N4N3 616 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 SPICQ8N5J4 248 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 ZNF283Q8N7M2 679 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 LRRC75AQ8NAA5 344 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 OR10AD1Q8NGE0 317 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 RASSF5Q8WWW0 418 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 POP5Q969H6 163 aaKnown RBP11.69□□□□□ -0.54
VARS-226ENST00000483275 ELOVL3Q9HB03 270 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 POLE4Q9NR33 117 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 STX18Q9P2W9 335 aaKnown RBP11.69□□□□□ -0.54
VARS-226ENST00000483275 BAG5Q9UL15 447 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 STARD10Q9Y365 291 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 INSIG2Q9Y5U4 225 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 SNX13Q9Y5W8 968 aa11.69□□□□□ -0.54
VARS-226ENST00000483275 NPIPB13A6NJU9 1138 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 NPIPB4C9JG80 1138 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 F5H0A9 414 aaPredicted RBP11.68□□□□□ -0.54
VARS-226ENST00000483275 J3KTA2 159 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 ICMTO60725 284 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 THRBP10828 461 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 GSTM3P21266 225 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 CD80P33681 288 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 GPR4P46093 362 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 MMP16P51512 607 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 PCBD1P61457 104 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 DEFA6Q01524 100 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 SRSF4Q08170 494 aaKnown RBP11.68□□□□□ -0.54
VARS-226ENST00000483275 DBPQ10586 325 aaPredicted RBP11.68□□□□□ -0.54
VARS-226ENST00000483275 HLXQ14774 488 aaPredicted RBP11.68□□□□□ -0.54
VARS-226ENST00000483275 SLC9A3R2Q15599 337 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 UNQ6126/PRO20091Q6UXV3 157 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 FOXL2NBQ6ZUU3 175 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 VTCN1Q7Z7D3 282 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 NRMQ8IXM6 262 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 ZNF420Q8TAQ5 688 aaPredicted RBP11.68□□□□□ -0.54
VARS-226ENST00000483275 LIPHQ8WWY8 451 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 CMBLQ96DG6 245 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 RBP7Q96R05 134 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 OR2V2Q96R30 315 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 ECSITQ9BQ95 431 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 MRI1Q9BV20 369 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 RERGLQ9H628 205 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 ZNF696Q9H7X3 374 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 MAN2C1Q9NTJ4 1040 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 PLEK2Q9NYT0 353 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 CGGBP1Q9UFW8 167 aaPredicted RBP11.68□□□□□ -0.54
VARS-226ENST00000483275 OR5V1Q9UGF6 321 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 A4GNTQ9UNA3 340 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 PPP1R3CQ9UQK1 317 aa11.68□□□□□ -0.54
VARS-226ENST00000483275 PPIAL4EA0A075B759 164 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 PPIAL4CA0A0B4J2A2 164 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 GMNCA6NCL1 334 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 CEACAM18A8MTB9 384 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 C12orf71A8MTZ7 269 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 PPIAL4DF5H284 164 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 H3BSA7 217 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 MRASO14807 208 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 IGF2P01344 180 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 DBHP09172 617 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 PPIAL4FP0DN26 164 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 NR2C1P13056 603 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 SELEP16581 610 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 ZNF26P17031 533 aaPredicted RBP11.67□□□□□ -0.54
VARS-226ENST00000483275 MDKP21741 143 aaPredicted RBP11.67□□□□□ -0.54
VARS-226ENST00000483275 TNFSF4P23510 183 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 LIPAP38571 399 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 SLC9A3P48764 834 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 HOXA4Q00056 320 aaPredicted RBP11.67□□□□□ -0.54
VARS-226ENST00000483275 MAPRE2Q15555 327 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 TMEM155Q4W5P6 130 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 ESCO2Q56NI9 601 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 MESTQ5EB52 335 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 FAM201AQ5SY85 155 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms