RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 ACAA2P42765 397 aaKnown RBP10.65□□□□□ -0.71
VTI1A-205ENST00000483122 RAB5CP51148 216 aa10.65□□□□□ -0.71
VTI1A-205ENST00000483122 ADAM8P78325 824 aa10.65□□□□□ -0.71
VTI1A-205ENST00000483122 PMPCAQ10713 525 aa10.65□□□□□ -0.71
VTI1A-205ENST00000483122 EXOSC6Q5RKV6 272 aaKnown RBP10.65□□□□□ -0.71
VTI1A-205ENST00000483122 TMEM240Q5SV17 173 aa10.65□□□□□ -0.71
VTI1A-205ENST00000483122 OTPQ5XKR4 325 aa10.65□□□□□ -0.71
VTI1A-205ENST00000483122 FAM166AQ6J272 317 aa10.65□□□□□ -0.71
VTI1A-205ENST00000483122 UNQ6494/PRO21346Q6UXR6 183 aa10.65□□□□□ -0.71
VTI1A-205ENST00000483122 DPY19L2P2Q6ZN68 376 aa10.65□□□□□ -0.71
VTI1A-205ENST00000483122 OR8U1Q8NH10 309 aa10.65□□□□□ -0.71
VTI1A-205ENST00000483122 RAB3CQ96E17 227 aa10.65□□□□□ -0.71
VTI1A-205ENST00000483122 RBM18Q96H35 190 aaKnown RBP10.65□□□□□ -0.71
VTI1A-205ENST00000483122 SLC17A5Q9NRA2 495 aa10.65□□□□□ -0.71
VTI1A-205ENST00000483122 DCAF16Q9NXF7 216 aa10.65□□□□□ -0.71
VTI1A-205ENST00000483122 WIF1Q9Y5W5 379 aa10.65□□□□□ -0.71
VTI1A-205ENST00000483122 KPTNQ9Y664 436 aa10.65□□□□□ -0.71
VTI1A-205ENST00000483122 A0A1W2PPE2 198 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 A0A1W2PRU2 124 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 URADA6NGE7 173 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 DCTN6O00399 190 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 EFSO43281 561 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 HOXA2O43364 376 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 DOK2O60496 412 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 LSSP48449 732 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 DVL1P1P54792 670 aaPredicted RBP10.64□□□□□ -0.71
VTI1A-205ENST00000483122 RPL7L1Q6DKI1 246 aaKnown RBP10.64□□□□□ -0.71
VTI1A-205ENST00000483122 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.64□□□□□ -0.71
VTI1A-205ENST00000483122 GVQW1Q8N7I0 195 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 AKR7LQ8NHP1 331 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 PPP1R14AQ96A00 147 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 PRDM13Q9H4Q3 707 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 OPA3Q9H6K4 179 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 TUBA4BQ9H853 241 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 SRA1Q9HD15 236 aaKnown RBP10.64□□□□□ -0.71
VTI1A-205ENST00000483122 CGGBP1Q9UFW8 167 aaPredicted RBP10.64□□□□□ -0.71
VTI1A-205ENST00000483122 PDE4DIPQ5VU43 2346 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 PTPRSQ13332 1948 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 DBX1A6NMT0 343 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 STK17BO94768 372 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 ZNF432O94892 652 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 GPANK1O95872 356 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 HOXB5P09067 269 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 HOXA5P20719 270 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 EBPQ15125 230 aaKnown RBP10.64□□□□□ -0.71
VTI1A-205ENST00000483122 MLF2Q15773 248 aaPredicted RBP10.64□□□□□ -0.71
VTI1A-205ENST00000483122 RNASE10Q5GAN6 216 aaKnown RBP10.64□□□□□ -0.71
VTI1A-205ENST00000483122 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.64□□□□□ -0.71
VTI1A-205ENST00000483122 LRRC69Q6ZNQ3 347 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 MTSS1LQ765P7 747 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 ZNF761Q86XN6 746 aaPredicted RBP10.64□□□□□ -0.71
VTI1A-205ENST00000483122 CDC20BQ86Y33 519 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 STX12Q86Y82 276 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 ZNF584Q8IVC4 421 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 SLC43A2Q8N370 569 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 FRMD1Q8N878 549 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 ZNF563Q8TA94 476 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 NMES1Q9C002 83 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 CAPN10Q9HC96 672 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 ZDHHC4Q9NPG8 344 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 TMEM74BQ9NUR3 256 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 PRR13Q9NZ81 148 aa10.64□□□□□ -0.71
VTI1A-205ENST00000483122 TMEM212A6NML5 194 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 BLOC1S5-TXNDC5H3BN57 136 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 H7C1C5 153 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 LATO43561 262 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 IFNA2P01563 188 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 CFPP27918 469 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 TACR3P29371 465 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 LCN6P62502 163 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 WDR38Q5JTN6 314 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 METRNLQ641Q3 311 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 KIRREL2Q6UWL6 708 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 CRIPAKQ8N1N5 446 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 MALSU1Q96EH3 234 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 OR5B2Q96R09 309 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 INSM2Q96T92 566 aaPredicted RBP10.63□□□□□ -0.71
VTI1A-205ENST00000483122 ELF4Q99607 663 aaPredicted RBP10.63□□□□□ -0.71
VTI1A-205ENST00000483122 PRRT1Q99946 306 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 SLC46A2Q9BY10 475 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 CHST5Q9GZS9 411 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 SLC5A7Q9GZV3 580 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 RGCCQ9H4X1 137 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 SLC2A4RGQ9NR83 387 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 LAMP5Q9UJQ1 280 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 WIPF3A6NGB9 483 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 ARGFXA6NJG6 315 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 EIF1AYO14602 144 aaKnown RBP10.63□□□□□ -0.71
VTI1A-205ENST00000483122 SLC31A2O15432 143 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 ADAP1O75689 374 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 DUS4LO95620 317 aaKnown RBP10.63□□□□□ -0.71
VTI1A-205ENST00000483122 EIF1AXP47813 144 aaKnown RBP10.63□□□□□ -0.71
VTI1A-205ENST00000483122 EXOSC7Q15024 291 aaKnown RBP10.63□□□□□ -0.71
VTI1A-205ENST00000483122 ZNF239Q16600 458 aaKnown RBP10.63□□□□□ -0.71
VTI1A-205ENST00000483122 FHL5Q5TD97 284 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 LINC00114Q6XXX2 140 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 Q6ZRG5 221 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 GKN2Q86XP6 184 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 ANGPTL5Q86XS5 388 aa10.63□□□□□ -0.71
VTI1A-205ENST00000483122 ZDHHC22Q8N966 263 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms