RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 NABP1Q96AH0 204 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 NMD3Q96D46 503 aaKnown RBP6.2□□□□□ -1.42
CSDE1-206ENST00000483030 DHRS1Q96LJ7 313 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 C4orf45Q96LM5 186 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 SAMD8Q96LT4 415 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 SIGLEC11Q96RL6 698 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 CCT8L2Q96SF2 557 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 PRSS27Q9BQR3 290 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 ZNF426Q9BUY5 554 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 OR2H1Q9GZK4 316 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 WNT5BQ9H1J7 359 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 NANOGQ9H9S0 305 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 ELOVL3Q9HB03 270 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 MEPEQ9NQ76 525 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-206ENST00000483030 INIPQ9NRY2 104 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 TNFRSF19Q9NS68 423 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 CCDC167Q9P0B6 97 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 CGGBP1Q9UFW8 167 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-206ENST00000483030 OR5V1Q9UGF6 321 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 CORO2BQ9UQ03 480 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 PPP1R3CQ9UQK1 317 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 ANGPT4Q9Y264 503 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 MMP24Q9Y5R2 645 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 GMEB1Q9Y692 573 aa6.2□□□□□ -1.42
CSDE1-206ENST00000483030 A0A1B0GUS0 222 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 CEACAM18A8MTB9 384 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 F5H0A9 414 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-206ENST00000483030 TMEM178BH3BS89 294 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 H3BSA7 217 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 HOXA3O43365 443 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-206ENST00000483030 ZNF205O95201 554 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 TGDSO95455 350 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 PLATP00750 562 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 CRYBA1P05813 215 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 CD247P20963 164 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 TNFSF4P23510 183 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 GSTT1P30711 240 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 MDH2P40926 338 aaKnown RBP6.19□□□□□ -1.42
CSDE1-206ENST00000483030 GUCA1AP43080 201 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-206ENST00000483030 DAP3P51398 398 aaKnown RBP6.19□□□□□ -1.42
CSDE1-206ENST00000483030 PCBP3P57721 371 aaKnown RBP6.19□□□□□ -1.42
CSDE1-206ENST00000483030 PAX2Q02962 417 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 CD47Q08722 323 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 DEFB112Q30KQ8 113 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 AGKQ53H12 422 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 RUNDC3AQ59EK9 446 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 ZNF774Q6NX45 483 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 WDR93Q6P2C0 686 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 SLC25A47Q6Q0C1 308 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 EPGNQ6UW88 154 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 BTNL3Q6UXE8 466 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 LRRN1Q6UXK5 716 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 DLEU7Q6UYE1 221 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 Q6ZR03 302 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 HDDC2Q7Z4H3 204 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 PTOV1Q86YD1 416 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 OR10S1Q8NGN2 331 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 OR4F5Q8NH21 305 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 PFN4Q8NHR9 129 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 ITLN1Q8WWA0 313 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 WFDC12Q8WWY7 111 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 RAB40AQ8WXH6 277 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 UPRTQ96BW1 309 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 CMBLQ96DG6 245 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 RBP7Q96R05 134 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 PKP2Q99959 881 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 CPPED1Q9BRF8 314 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-206ENST00000483030 SSBP3Q9BWW4 388 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-206ENST00000483030 POFUT1Q9H488 388 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 SMURF2Q9HAU4 748 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 BEX1Q9HBH7 125 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 MAN2C1Q9NTJ4 1040 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 ARMCX1Q9P291 453 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.19□□□□□ -1.42
CSDE1-206ENST00000483030 IL20RAQ9UHF4 553 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 TIMM10BQ9Y5J6 103 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 USH1CQ9Y6N9 552 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 V9GYY5 206 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-206ENST00000483030 VWFP04275 2813 aa6.19□□□□□ -1.42
CSDE1-206ENST00000483030 TRAV40A0A0B4J280 105 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 SURF4O15260 269 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 POLR3GO15318 223 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-206ENST00000483030 ERLIN1O75477 346 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 OR7A10O76100 309 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 ABHD16AO95870 558 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 MT-ND1P03886 318 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 CST2P09228 141 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 PPIAL4GP0DN37 164 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 GSTM3P21266 225 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 MRPL19P49406 292 aaKnown RBP6.18□□□□□ -1.42
CSDE1-206ENST00000483030 IDH3AP50213 366 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 RAG2P55895 527 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 PCBD1P61457 104 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 TOP3AQ13472 1001 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-206ENST00000483030 CYP51A1Q16850 503 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 ZNF362Q5T0B9 420 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-206ENST00000483030 OLFML2AQ68BL7 652 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 ARL9Q6T311 187 aa6.18□□□□□ -1.42
CSDE1-206ENST00000483030 FIP1L1Q6UN15 594 aaKnown RBP6.18□□□□□ -1.42
CSDE1-206ENST00000483030 BRD3OSQ6XYD6 125 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms