RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 JAM3Q9BX67 310 aa13.21□□□□□ -0.29
PHGDH-205ENST00000482968 SIAEQ9HAT2 523 aa13.21□□□□□ -0.29
PHGDH-205ENST00000482968 POLEQ07864 2286 aa13.21□□□□□ -0.3
PHGDH-205ENST00000482968 NCOA6Q14686 2063 aaPredicted RBP13.21□□□□□ -0.3
PHGDH-205ENST00000482968 A0A096LPE4 126 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 A0A1W2PPZ6 126 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 MYL12BO14950 172 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 ATP6V1G1O75348 118 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 LCKP06239 509 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 ITGA5P08648 1049 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 ALOX5APP20292 161 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 MPGP29372 298 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 OPRM1P35372 400 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 CD79BP40259 229 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 LSM6P62312 80 aaKnown RBP13.2□□□□□ -0.3
PHGDH-205ENST00000482968 EIF2B1Q14232 305 aaKnown RBP13.2□□□□□ -0.3
PHGDH-205ENST00000482968 ZNF846Q147U1 533 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 MED22Q15528 200 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 PCK2Q16822 640 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 TEX30Q5JUR7 227 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 FAM27BQ5VT28 67 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 RNLSQ5VYX0 342 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 XAF1Q6GPH4 301 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 KLHL24Q6TFL4 600 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 Q6ZT83 130 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 DCXRQ7Z4W1 244 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 OR2AJ1Q8NGZ0 328 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 WDR12Q9GZL7 423 aaKnown RBP13.2□□□□□ -0.3
PHGDH-205ENST00000482968 HMG20AQ9NP66 347 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 INPP5EQ9NRR6 644 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 ASH2LQ9UBL3 628 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 CYB5R1Q9UHQ9 305 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 TMEM14AQ9Y6G1 99 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 NBASA2RRP1 2371 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 SMG1Q96Q15 3661 aaKnown RBP13.2□□□□□ -0.3
PHGDH-205ENST00000482968 CLPXO76031 633 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 CNOT4O95628 575 aaKnown RBP13.2□□□□□ -0.3
PHGDH-205ENST00000482968 IL18BPO95998 194 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 OR8G3PP0DMU2 310 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 CD8BP10966 210 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 IGHV1-2P23083 117 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 BCAP31P51572 246 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 ENDOGQ14249 297 aaKnown RBP13.2□□□□□ -0.3
PHGDH-205ENST00000482968 SLC18B1Q6NT16 456 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 LUZP2Q86TE4 346 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 SKA3Q8IX90 412 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 SNX33Q8WV41 574 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 GATAD2BQ8WXI9 593 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 OR5M11Q96RB7 305 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 AMELYQ99218 206 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 MNTQ99583 582 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 ABHD6Q9BV23 337 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 MND1Q9BWT6 205 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 ISG20L2Q9H9L3 353 aaKnown RBP13.2□□□□□ -0.3
PHGDH-205ENST00000482968 ZNF629Q9UEG4 869 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-205ENST00000482968 LHFPL6Q9Y693 200 aa13.2□□□□□ -0.3
PHGDH-205ENST00000482968 FUOMA2VDF0 154 aa13.19□□□□□ -0.3
PHGDH-205ENST00000482968 J3QLW9 94 aa13.19□□□□□ -0.3
PHGDH-205ENST00000482968 LYZL6O75951 148 aa13.19□□□□□ -0.3
PHGDH-205ENST00000482968 INHBBP09529 407 aa13.19□□□□□ -0.3
PHGDH-205ENST00000482968 PATE4P0C8F1 98 aa13.19□□□□□ -0.3
PHGDH-205ENST00000482968 ZNF19P17023 458 aa13.19□□□□□ -0.3
PHGDH-205ENST00000482968 OR12D2P58182 307 aa13.19□□□□□ -0.3
PHGDH-205ENST00000482968 TBCEQ15813 527 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-205ENST00000482968 STK11Q15831 433 aa13.19□□□□□ -0.3
PHGDH-205ENST00000482968 ZNF322Q6U7Q0 402 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-205ENST00000482968 TMPRSS11AQ6ZMR5 421 aa13.19□□□□□ -0.3
PHGDH-205ENST00000482968 BEND4Q6ZU67 534 aa13.19□□□□□ -0.3
PHGDH-205ENST00000482968 SPATC1Q76KD6 591 aa13.19□□□□□ -0.3
PHGDH-205ENST00000482968 FJX1Q86VR8 437 aa13.19□□□□□ -0.3
PHGDH-205ENST00000482968 KLHL36Q8N4N3 616 aa13.19□□□□□ -0.3
PHGDH-205ENST00000482968 ZNF454Q8N9F8 522 aa13.19□□□□□ -0.3
PHGDH-205ENST00000482968 PRR7Q8TB68 274 aa13.19□□□□□ -0.3
PHGDH-205ENST00000482968 SPRYD4Q8WW59 207 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-205ENST00000482968 FBXO17Q96EF6 278 aa13.19□□□□□ -0.3
PHGDH-205ENST00000482968 PCNX1Q96RV3 2341 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 A0A1W2PPW3 197 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 TMEM129A0AVI4 362 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 PRR32B1ATL7 298 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 B8ZZF3 427 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 RER1O15258 196 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 MAGEB3O15480 346 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 INMTO95050 263 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 FARS2O95363 451 aaKnown RBP13.18□□□□□ -0.3
PHGDH-205ENST00000482968 HSMCR30P0CW71 290 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 SERPINB10P48595 397 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 SPHARQ15513 63 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 TSC22D1Q15714 1073 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 TP53I3Q53FA7 332 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 SLC16A14Q7RTX9 510 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 LIX1LQ8IVB5 337 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 GABRG1Q8N1C3 465 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 CENPSQ8N2Z9 138 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 RORBQ92753 470 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 MAP6Q96JE9 813 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 C4orf36Q96KX1 117 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 C1orf198Q9H425 327 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 CENPMQ9NSP4 180 aa13.18□□□□□ -0.3
PHGDH-205ENST00000482968 GDF2Q9UK05 429 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-205ENST00000482968 IKZF2Q9UKS7 526 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms