RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 OR51M1Q9H341 326 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 TMEM100Q9NV29 134 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 FARSAQ9Y285 508 aaKnown RBP12.89□□□□□ -0.35
COL9A2-207ENST00000482722 DTX4Q9Y2E6 619 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 ITGA5P08648 1049 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 PGAM2P15259 253 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 C2orf76Q3KRA6 126 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 LINC01590Q5TEZ4 76 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 CHRDL2Q6WN34 429 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 FAM220AQ7Z4H9 259 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 TDHQ8IZJ6 230 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 ZNF676Q8N7Q3 588 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 OR10R2Q8NGX6 335 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 FOXN4Q96NZ1 517 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 LMF1Q96S06 567 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 SELENOIQ9C0D9 397 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 DNAJB12Q9NXW2 375 aaKnown RBP12.89□□□□□ -0.35
COL9A2-207ENST00000482722 CNTRLQ7Z7A1 2325 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 UBE2CO00762 179 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 SRPX2O60687 465 aaPredicted RBP12.88□□□□□ -0.35
COL9A2-207ENST00000482722 PTAFRP25105 342 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 PPT1P50897 306 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 ACTBP60709 375 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 ACTG1P63261 375 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 PSG6Q00889 435 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 MGAT2Q10469 447 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 EIF2S3LQ2VIR3 472 aaKnown RBP12.88□□□□□ -0.35
COL9A2-207ENST00000482722 COL13A1Q5TAT6 717 aaPredicted RBP12.88□□□□□ -0.35
COL9A2-207ENST00000482722 SLC22A18ASQ8N1D0 253 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 CA13Q8N1Q1 262 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 SEH1LQ96EE3 360 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 SPACA7Q96KW9 195 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 LRFN5Q96NI6 719 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 STACQ99469 402 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 NRIP2Q9BQI9 281 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 ZNF426Q9BUY5 554 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 RNF122Q9H9V4 155 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 MMP26Q9NRE1 261 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 GHRLQ9UBU3 117 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 GTF2A1LQ9UNN4 478 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 ARID1AO14497 2285 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 A0A1W2PPE3 182 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 F13BP05160 661 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 S100A6P06703 90 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 ZNF735P0CB33 412 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 AVPR2P30518 371 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 AQP2P41181 271 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 ALG11Q2TAA5 492 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 MST1LQ2TV78 715 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 AKIRIN2Q53H80 203 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 NKAPLQ5M9Q1 402 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 ETV3LQ6ZN32 361 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 RHOUQ7L0Q8 258 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 METTL27Q8N6F8 245 aaPredicted RBP12.88□□□□□ -0.35
COL9A2-207ENST00000482722 OR13C8Q8NGS7 320 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 RNF141Q8WVD5 230 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 INTS12Q96CB8 462 aaKnown RBP12.88□□□□□ -0.35
COL9A2-207ENST00000482722 NMNAT2Q9BZQ4 307 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 SEBOXQ9HB31 216 aaPredicted RBP12.88□□□□□ -0.35
COL9A2-207ENST00000482722 MKKSQ9NPJ1 570 aaPredicted RBP12.88□□□□□ -0.35
COL9A2-207ENST00000482722 RCC2Q9P258 522 aaKnown RBP12.88□□□□□ -0.35
COL9A2-207ENST00000482722 NUP210LQ5VU65 1888 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 RP1P56715 2156 aa12.88□□□□□ -0.35
COL9A2-207ENST00000482722 A0A087WV62 115 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 TRBV5-7A0A0A0MS05 114 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 A0A0A6YYC8 382 aaPredicted RBP12.87□□□□□ -0.35
COL9A2-207ENST00000482722 A0A0B4J2A0 478 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 I3L1I5 382 aaPredicted RBP12.87□□□□□ -0.35
COL9A2-207ENST00000482722 CD74P04233 296 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 DCNP07585 359 aaKnown RBP12.87□□□□□ -0.35
COL9A2-207ENST00000482722 TACSTD2P09758 323 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 FOLR2P14207 255 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 ZNF44P15621 663 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 ZNF28P17035 718 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 ABCD3P28288 659 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 CCR4P51679 360 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 SCAND1P57086 179 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 ZNHIT3Q15649 155 aaPredicted RBP12.87□□□□□ -0.35
COL9A2-207ENST00000482722 SLC35D3Q5M8T2 416 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 PARGQ86W56 976 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 PAQR4Q8N4S7 273 aaPredicted RBP12.87□□□□□ -0.35
COL9A2-207ENST00000482722 TMEM229BQ8NBD8 167 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 ZNF417Q8TAU3 575 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 STOML3Q8TAV4 291 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 FAM3DQ96BQ1 224 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 SCARF2Q96GP6 870 aaPredicted RBP12.87□□□□□ -0.35
COL9A2-207ENST00000482722 SEMA6CQ9H3T2 930 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 LYRM4Q9HD34 91 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 MYOZ1Q9NP98 299 aaPredicted RBP12.87□□□□□ -0.35
COL9A2-207ENST00000482722 SHPKQ9UHJ6 478 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 CA14Q9ULX7 337 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 VSIG4Q9Y279 399 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 EFCAB7A8K855 629 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 C1orf196B1AJZ1 125 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 EEF1E1-BLOC1S5C9J1V9 151 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 ZNF208O43345 1280 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 CDC40O60508 579 aaKnown RBP eCLIP12.87□□□□□ -0.35
COL9A2-207ENST00000482722 GLCEO94923 617 aa12.87□□□□□ -0.35
COL9A2-207ENST00000482722 TPT1P13693 172 aaKnown RBP12.87□□□□□ -0.35
COL9A2-207ENST00000482722 MUC1P15941 1255 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms