RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 TSPAN7P41732 249 aa12.91□□□□□ -0.34
CHD3-211ENST00000481999 DNASE1L1P49184 302 aa12.91□□□□□ -0.34
CHD3-211ENST00000481999 TMEM176BQ3YBM2 270 aaPredicted RBP12.91□□□□□ -0.34
CHD3-211ENST00000481999 ZBTB37Q5TC79 503 aa12.91□□□□□ -0.34
CHD3-211ENST00000481999 SUMF1Q8NBK3 374 aa12.91□□□□□ -0.34
CHD3-211ENST00000481999 OR5AK2Q8NH90 309 aa12.91□□□□□ -0.34
CHD3-211ENST00000481999 C15orf40Q8WUR7 153 aa12.91□□□□□ -0.34
CHD3-211ENST00000481999 FCAMRQ8WWV6 532 aa12.91□□□□□ -0.34
CHD3-211ENST00000481999 MAP6Q96JE9 813 aa12.91□□□□□ -0.34
CHD3-211ENST00000481999 HRASLSQ9HDD0 168 aa12.91□□□□□ -0.34
CHD3-211ENST00000481999 IGHV3-15A0A0B4J1V0 119 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 NOS1APO75052 506 aaPredicted RBP12.9□□□□□ -0.34
CHD3-211ENST00000481999 NBL1P41271 181 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 PER3P56645 1201 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 ADAM8P78325 824 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 ALKBH1Q13686 389 aaKnown RBP12.9□□□□□ -0.34
CHD3-211ENST00000481999 STPG1Q5TH74 334 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 C6orf15Q6UXA7 325 aaPredicted RBP12.9□□□□□ -0.34
CHD3-211ENST00000481999 H1FNTQ75WM6 255 aaPredicted RBP12.9□□□□□ -0.34
CHD3-211ENST00000481999 NDUFAF7Q7L592 441 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 OR52I2Q8NH67 350 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 DDIT4LQ96D03 193 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 CITED4Q96RK1 184 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 GTF2A1LQ9UNN4 478 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 AKAP13Q12802 2813 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 TPOP07202 933 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 PSMB1P20618 241 aaKnown RBP12.9□□□□□ -0.34
CHD3-211ENST00000481999 OR3A3P47888 321 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 BIDP55957 195 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 CLDN12P56749 244 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 HSF1Q00613 529 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 ELFN2Q5R3F8 820 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 CARD17Q5XLA6 110 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 STAC2Q6ZMT1 411 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 BEST4Q8NFU0 473 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 OR11H4Q8NGC9 324 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 MNTQ99583 582 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 SERINC1Q9NRX5 453 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 OR5V1Q9UGF6 321 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 SCP2D1Q9UJQ7 156 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 ELF5Q9UKW6 265 aaPredicted RBP12.9□□□□□ -0.34
CHD3-211ENST00000481999 ETV7Q9Y603 341 aa12.9□□□□□ -0.34
CHD3-211ENST00000481999 NPIPA5E9PKD4 350 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 TGM6O95932 706 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 PNPP00491 289 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 SDHBP21912 280 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 PTH2RP49190 550 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 SSR4P51571 173 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 MFAP5Q13361 173 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 CAMK2DQ13557 499 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 TOMM20Q15388 145 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 EXT1Q16394 746 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 TMEM69Q5SWH9 247 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 SFRP4Q6FHJ7 346 aaPredicted RBP12.89□□□□□ -0.35
CHD3-211ENST00000481999 OR7E24Q6IFN5 339 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 PRSS35Q8N3Z0 413 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 DNAAF1Q8NEP3 725 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 MFSD8Q8NHS3 518 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 SYNPRQ8TBG9 265 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 ASB10Q8WXI3 467 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 MRGPRX4Q96LA9 322 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 CHST11Q9NPF2 352 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 NKIRAS2Q9NYR9 191 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 KLHL13Q9P2N7 655 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 FBXL3Q9UKT7 428 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 NPIPA1Q9UND3 350 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 FOXJ3Q9UPW0 622 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 DMXL2Q8TDJ6 3036 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 TRBV5-5A0A0J9YX44 114 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 ZNF432O94892 652 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 RAF1P04049 648 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 MNDAP41218 407 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 ART1P52961 327 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 SUMO3P55854 103 aaPredicted RBP12.89□□□□□ -0.35
CHD3-211ENST00000481999 TEX261Q6UWH6 196 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 FAM109AQ8N4B1 249 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 OTOSQ8NHW6 89 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 MIB2Q96AX9 1013 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 HAVCR1Q96D42 359 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 HPF1Q9NWY4 346 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 MRPL15Q9P015 296 aaKnown RBP12.89□□□□□ -0.35
CHD3-211ENST00000481999 SLC22A13Q9Y226 551 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 PCDHGA5Q9Y5G8 931 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 NPTNQ9Y639 398 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 U3KQ87 197 aa12.89□□□□□ -0.35
CHD3-211ENST00000481999 ATMQ13315 3056 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 GMDSO60547 372 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 KHDRBS3O75525 346 aaKnown RBP12.88□□□□□ -0.35
CHD3-211ENST00000481999 TPPPO94811 219 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 EIF1AXP47813 144 aaKnown RBP12.88□□□□□ -0.35
CHD3-211ENST00000481999 MFGE8Q08431 387 aaPredicted RBP12.88□□□□□ -0.35
CHD3-211ENST00000481999 RAET1LQ5VY80 246 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 C3orf33Q6P1S2 294 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 SERPINA12Q8IW75 414 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 PIAS4Q8N2W9 510 aaPredicted RBP12.88□□□□□ -0.35
CHD3-211ENST00000481999 FADS6Q8N9I5 356 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 GCDHQ92947 438 aaPredicted RBP12.88□□□□□ -0.35
CHD3-211ENST00000481999 MS4A3Q96HJ5 214 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 KLHL15Q96M94 604 aa12.88□□□□□ -0.35
CHD3-211ENST00000481999 ELOVL3Q9HB03 270 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms