RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ELOVL3Q9HB03 270 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 G6PC2Q9NQR9 355 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 DCAF16Q9NXF7 216 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 NDUFAF4Q9P032 175 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 ABCD2Q9UBJ2 740 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 KLHL21Q9UJP4 597 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 LOC105371242A0A075B767 164 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 TRAV20A0A0B4J274 112 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 TRBV4-1A0A0J9YWV2 114 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 TIMM8AO60220 97 aaPredicted RBP15.73■□□□□ 0.11
CLK1-211ENST00000481641 DOK2O60496 412 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 ICMTO60725 284 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 UBOX5O94941 541 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 ABHD16AO95870 558 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 IGHV2-5P01817 119 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 H1F0P07305 194 aaKnown RBP15.73■□□□□ 0.11
CLK1-211ENST00000481641 HTR5AP47898 357 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 ARHGDIAP52565 204 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 KRR1Q13601 381 aaKnown RBP15.73■□□□□ 0.11
CLK1-211ENST00000481641 SEC23BQ15437 767 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 GLYATQ6IB77 296 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 SHQ1Q6PI26 577 aaKnown RBP15.73■□□□□ 0.11
CLK1-211ENST00000481641 SYT9Q86SS6 491 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 RNF148Q8N7C7 305 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.73■□□□□ 0.11
CLK1-211ENST00000481641 OR52J3Q8NH60 311 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 RAB1CQ92928 201 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 MYLK2Q9H1R3 596 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 SYT4Q9H2B2 425 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 ANKRD19PQ9H560 264 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 NDRG4Q9ULP0 352 aaKnown RBP15.73■□□□□ 0.11
CLK1-211ENST00000481641 SIGLEC7Q9Y286 467 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 TMEM5Q9Y2B1 443 aa15.73■□□□□ 0.11
CLK1-211ENST00000481641 COA3Q9Y2R0 106 aaPredicted RBP15.73■□□□□ 0.11
CLK1-211ENST00000481641 SGCEO43556 437 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 SLC16A7O60669 478 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 NDUFB2O95178 105 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 GPANK1O95872 356 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 PNPP00491 289 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 OMPP47874 163 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 LIMS1P48059 325 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 FXYD6P3P58550 94 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 DBPQ10586 325 aaPredicted RBP15.72■□□□□ 0.11
CLK1-211ENST00000481641 C1orf94Q6P1W5 598 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 PTCHD4Q6ZW05 846 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 VASH1Q7L8A9 365 aaPredicted RBP15.72■□□□□ 0.11
CLK1-211ENST00000481641 RAB39BQ96DA2 213 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 TIMD4Q96H15 378 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 RSRC1Q96IZ7 334 aaKnown RBP15.72■□□□□ 0.11
CLK1-211ENST00000481641 C7orf34Q96L11 122 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 GPA33Q99795 319 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 MED4Q9NPJ6 270 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 CYSLTR2Q9NS75 346 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 RPS6KA6Q9UK32 745 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 STARD10Q9Y365 291 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 FAM32AQ9Y421 112 aaKnown RBP15.72■□□□□ 0.11
CLK1-211ENST00000481641 IER3IP1Q9Y5U9 82 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 V9GYQ6 96 aa15.72■□□□□ 0.11
CLK1-211ENST00000481641 TANC2Q9HCD6 1990 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 A0A1W2PRQ8 180 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 ISPDA4D126 451 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 SOCS2O14508 198 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 ADH4P08319 380 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 COX5BP10606 129 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 ANPEPP15144 967 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 SDHAP31040 664 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 ERFP50548 548 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 TNFAIP6P98066 277 aaPredicted RBP15.71■□□□□ 0.11
CLK1-211ENST00000481641 SCRN3Q0VDG4 424 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 DGCR6Q14129 220 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 MTX3Q5HYI7 312 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 ARL9Q6T311 187 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 Q6ZR03 302 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 C1orf174Q8IYL3 243 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 DCLRE1CQ96SD1 692 aaKnown RBP15.71■□□□□ 0.11
CLK1-211ENST00000481641 GAL3ST1Q99999 423 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 TMPRSS13Q9BYE2 586 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 EGLN1Q9GZT9 426 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 FAM107BQ9H098 131 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 NRIP3Q9NQ35 241 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 DCAF13Q9NV06 445 aaKnown RBP15.71■□□□□ 0.11
CLK1-211ENST00000481641 PLEK2Q9NYT0 353 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 UBAP1Q9NZ09 502 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 ADA2Q9NZK5 511 aa15.71■□□□□ 0.11
CLK1-211ENST00000481641 DYSFO75923 2080 aa15.71■□□□□ 0.1
CLK1-211ENST00000481641 UNC119BA6NIH7 251 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 H3BSA7 217 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 HAX1O00165 279 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 NDUFAB1O14561 156 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 AHCYL1O43865 530 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 KHDRBS3O75525 346 aaKnown RBP15.7■□□□□ 0.1
CLK1-211ENST00000481641 CD55P08174 381 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 RHCEP18577 417 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 ADRA2CP18825 462 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 LIPAP38571 399 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 CDKN2AP42771 156 aaKnown RBP15.7■□□□□ 0.1
CLK1-211ENST00000481641 CDK5R2Q13319 367 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 CCDC92Q53HC0 331 aaPredicted RBP15.7■□□□□ 0.1
CLK1-211ENST00000481641 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.7■□□□□ 0.1
CLK1-211ENST00000481641 CMBLQ96DG6 245 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms