RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 PLEK2Q9NYT0 353 aa13.12□□□□□ -0.31
CDK9-203ENST00000480353 B2RBV5 119 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 SPRY3O43610 288 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 TIMM8AO60220 97 aaPredicted RBP13.11□□□□□ -0.31
CDK9-203ENST00000480353 LILRA1O75019 489 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 PTP4A3O75365 173 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 NCR1O76036 304 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 PPP1R3DO95685 299 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 IGHV3-13P01766 116 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 CTLA4P16410 223 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 IGFBP5P24593 272 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 CRABP1P29762 137 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 WNT5AP41221 380 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 CDH15P55291 814 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 ENDOGQ14249 297 aaKnown RBP13.11□□□□□ -0.31
CDK9-203ENST00000480353 HFEQ30201 348 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 FAM120AOSQ5T036 256 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 C1orf94Q6P1W5 598 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 IL17RELQ6ZVW7 336 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 ZER1Q7Z7L7 766 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.11□□□□□ -0.31
CDK9-203ENST00000480353 NPEPL1Q8NDH3 523 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 KLF14Q8TD94 323 aaPredicted RBP13.11□□□□□ -0.31
CDK9-203ENST00000480353 GNPDA2Q8TDQ7 276 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 IPCEF1Q8WWN9 437 aaPredicted RBP13.11□□□□□ -0.31
CDK9-203ENST00000480353 TIMD4Q96H15 378 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 NKIRAS2Q9NYR9 191 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 CD300AQ9UGN4 299 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 COA3Q9Y2R0 106 aaPredicted RBP13.11□□□□□ -0.31
CDK9-203ENST00000480353 GRIP1Q9Y3R0 1128 aa13.11□□□□□ -0.31
CDK9-203ENST00000480353 IGHV1-69-2A0A0G2JMI3 117 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 RNF212BA8MTL3 300 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 CLDN25C9JDP6 229 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 H3BSA7 217 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 COX5BP10606 129 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 IL2RGP31785 369 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 SRP14P37108 136 aaKnown RBP13.1□□□□□ -0.31
CDK9-203ENST00000480353 MPV17P39210 176 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 MBNL2Q5VZF2 373 aaKnown RBP13.1□□□□□ -0.31
CDK9-203ENST00000480353 LEG1Q6P5S2 330 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 PGM2L1Q6PCE3 622 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 CYP2R1Q6VVX0 501 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 THSD4Q6ZMP0 1018 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 RFPL4BQ6ZWI9 263 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 USP51Q70EK9 711 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 OR52L1Q8NGH7 329 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 YIPF5Q969M3 257 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 ELMOD3Q96FG2 381 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 MARS2Q96GW9 593 aaKnown RBP13.1□□□□□ -0.31
CDK9-203ENST00000480353 NSL1Q96IY1 281 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 DHRS1Q96LJ7 313 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 COG8Q96MW5 612 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 CCT8L2Q96SF2 557 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 NUAK2Q9H093 628 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 OR52D1Q9H346 318 aa13.1□□□□□ -0.31
CDK9-203ENST00000480353 VSX1Q9NZR4 365 aaPredicted RBP13.1□□□□□ -0.31
CDK9-203ENST00000480353 CGGBP1Q9UFW8 167 aaPredicted RBP13.1□□□□□ -0.31
CDK9-203ENST00000480353 B4DSR2 109 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 KRT36O76013 467 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 HLA-DQA2P01906 255 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 TFP02787 698 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 ZNF26P17031 533 aaPredicted RBP13.09□□□□□ -0.31
CDK9-203ENST00000480353 TNFSF4P23510 183 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 LSM6P62312 80 aaKnown RBP13.09□□□□□ -0.31
CDK9-203ENST00000480353 MVKQ03426 396 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 CR1LQ2VPA4 569 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 RFX4Q33E94 735 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 MTX3Q5HYI7 312 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 FAM209AQ5JX71 171 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 CXXC5Q7LFL8 322 aaKnown RBP13.09□□□□□ -0.31
CDK9-203ENST00000480353 PEG10Q86TG7 708 aaKnown RBP13.09□□□□□ -0.31
CDK9-203ENST00000480353 GLCCI1Q86VQ1 547 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 LINC00471Q8N535 108 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 CCDC197Q8NCU1 140 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 CLDND2Q8NHS1 167 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 TMEM158Q8WZ71 300 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 LRGUKQ96M69 825 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 DIRC2Q96SL1 478 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 MDFIQ99750 246 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 CDADC1Q9BWV3 514 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 SRA1Q9HD15 236 aaKnown RBP13.09□□□□□ -0.31
CDK9-203ENST00000480353 IL1RAPQ9NPH3 570 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 ASH2LQ9UBL3 628 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 TMEFF2Q9UIK5 374 aaPredicted RBP13.09□□□□□ -0.31
CDK9-203ENST00000480353 ZDHHC8Q9ULC8 765 aa13.09□□□□□ -0.31
CDK9-203ENST00000480353 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.08□□□□□ -0.311e-7■■■■□ 22
CDK9-203ENST00000480353 TNFRSF11BO00300 401 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 IMPA2O14732 288 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 NGFP01138 241 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 SEMG1P04279 462 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 SCG5P05408 212 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 ANPEPP15144 967 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 TUBG1P23258 451 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 FPR3P25089 353 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 CDKN2AP42771 156 aaKnown RBP13.08□□□□□ -0.32
CDK9-203ENST00000480353 CRYBB2P43320 205 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 SLC3A1Q07837 685 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 SLC36A3Q495N2 470 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 AVPI1Q5T686 147 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 RPL13AP3Q6NVV1 102 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms