RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 PIGTQ969N2 578 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 ASH2LQ9UBL3 628 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 POU2F3Q9UKI9 436 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 LHFPL6Q9Y693 200 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 ITPR3Q14573 2671 aa23.18■■□□□ 1.3
CCM2-211ENST00000478582 PRODHO43272 600 aa23.17■■□□□ 1.3
CCM2-211ENST00000478582 SNAP29O95721 258 aa23.17■■□□□ 1.3
CCM2-211ENST00000478582 COX5BP10606 129 aa23.17■■□□□ 1.3
CCM2-211ENST00000478582 GGT2P36268 569 aa23.17■■□□□ 1.3
CCM2-211ENST00000478582 HGFACQ04756 655 aa23.17■■□□□ 1.3
CCM2-211ENST00000478582 OTPQ5XKR4 325 aa23.17■■□□□ 1.3
CCM2-211ENST00000478582 B3GLCTQ6Y288 498 aa23.17■■□□□ 1.3
CCM2-211ENST00000478582 NUP37Q8NFH4 326 aa23.17■■□□□ 1.3
CCM2-211ENST00000478582 AKR7LQ8NHP1 331 aa23.17■■□□□ 1.3
CCM2-211ENST00000478582 DHRS9Q9BPW9 319 aa23.17■■□□□ 1.3
CCM2-211ENST00000478582 TMUB1Q9BVT8 246 aa23.17■■□□□ 1.3
CCM2-211ENST00000478582 GRIP2Q9C0E4 1043 aa23.17■■□□□ 1.3
CCM2-211ENST00000478582 CYB5R1Q9UHQ9 305 aa23.17■■□□□ 1.3
CCM2-211ENST00000478582 ATP23Q9Y6H3 246 aa23.17■■□□□ 1.3
CCM2-211ENST00000478582 CADP27708 2225 aa23.17■■□□□ 1.3
CCM2-211ENST00000478582 GLCEO94923 617 aa23.16■■□□□ 1.3
CCM2-211ENST00000478582 STOMP27105 288 aa23.16■■□□□ 1.3
CCM2-211ENST00000478582 APEX1P27695 318 aaKnown RBP23.16■■□□□ 1.3
CCM2-211ENST00000478582 ADAM8P78325 824 aa23.16■■□□□ 1.3
CCM2-211ENST00000478582 TBC1D28Q2M2D7 210 aa23.16■■□□□ 1.3
CCM2-211ENST00000478582 ZNF774Q6NX45 483 aa23.16■■□□□ 1.3
CCM2-211ENST00000478582 CXXC5Q7LFL8 322 aaKnown RBP23.16■■□□□ 1.3
CCM2-211ENST00000478582 GJC3Q8NFK1 279 aa23.16■■□□□ 1.3
CCM2-211ENST00000478582 OTULINQ96BN8 352 aa23.16■■□□□ 1.3
CCM2-211ENST00000478582 POM121L2Q96KW2 1035 aa23.16■■□□□ 1.3
CCM2-211ENST00000478582 MARCH7Q9H992 704 aa23.16■■□□□ 1.3
CCM2-211ENST00000478582 C8orf4Q9NR00 106 aa23.16■■□□□ 1.3
CCM2-211ENST00000478582 POLR1DQ9Y2S0 133 aa23.16■■□□□ 1.3
CCM2-211ENST00000478582 DSCAMO60469 2012 aa23.16■■□□□ 1.3
CCM2-211ENST00000478582 SGCEO43556 437 aa23.15■■□□□ 1.3
CCM2-211ENST00000478582 PRKYO43930 277 aa23.15■■□□□ 1.3
CCM2-211ENST00000478582 DANCRP0C864 163 aa23.15■■□□□ 1.3
CCM2-211ENST00000478582 CD99P14209 185 aa23.15■■□□□ 1.3
CCM2-211ENST00000478582 ZNF823P16415 610 aa23.15■■□□□ 1.3
CCM2-211ENST00000478582 APLNRP35414 380 aa23.15■■□□□ 1.3
CCM2-211ENST00000478582 NKX6-1P78426 367 aaPredicted RBP23.15■■□□□ 1.3
CCM2-211ENST00000478582 TRIP10Q15642 601 aa23.15■■□□□ 1.3
CCM2-211ENST00000478582 PCK2Q16822 640 aa23.15■■□□□ 1.3
CCM2-211ENST00000478582 TEX30Q5JUR7 227 aa23.15■■□□□ 1.3
CCM2-211ENST00000478582 SLC35D3Q5M8T2 416 aa23.15■■□□□ 1.3
CCM2-211ENST00000478582 ZNF544Q6NX49 715 aa23.15■■□□□ 1.3
CCM2-211ENST00000478582 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.15■■□□□ 1.3
CCM2-211ENST00000478582 ZNF511Q8NB15 262 aa23.15■■□□□ 1.3
CCM2-211ENST00000478582 HRASLS5Q96KN8 279 aa23.15■■□□□ 1.3
CCM2-211ENST00000478582 CDADC1Q9BWV3 514 aa23.15■■□□□ 1.3
CCM2-211ENST00000478582 OR51V1Q9H2C8 321 aa23.15■■□□□ 1.3
CCM2-211ENST00000478582 COMMD3-BMI1R4GMX3 469 aa23.15■■□□□ 1.3
CCM2-211ENST00000478582 ROS1P08922 2347 aa23.14■■□□□ 1.3
CCM2-211ENST00000478582 TVP23AA6NH52 213 aa23.14■■□□□ 1.29
CCM2-211ENST00000478582 CASQ2O14958 399 aaPredicted RBP23.14■■□□□ 1.29
CCM2-211ENST00000478582 SLC2A5P22732 501 aa23.14■■□□□ 1.29
CCM2-211ENST00000478582 NR4A1P22736 598 aa23.14■■□□□ 1.29
CCM2-211ENST00000478582 CCDC92Q53HC0 331 aaPredicted RBP23.14■■□□□ 1.29
CCM2-211ENST00000478582 SLC18B1Q6NT16 456 aa23.14■■□□□ 1.29
CCM2-211ENST00000478582 VASH1Q7L8A9 365 aaPredicted RBP23.14■■□□□ 1.29
CCM2-211ENST00000478582 TCEANCQ8N8B7 351 aa23.14■■□□□ 1.29
CCM2-211ENST00000478582 OR6K6Q8NGW6 343 aa23.14■■□□□ 1.29
CCM2-211ENST00000478582 TMEM163Q8TC26 289 aa23.14■■□□□ 1.29
CCM2-211ENST00000478582 SMAP2Q8WU79 429 aaPredicted RBP23.14■■□□□ 1.29
CCM2-211ENST00000478582 IGFBPL1Q8WX77 278 aa23.14■■□□□ 1.29
CCM2-211ENST00000478582 CCL19Q99731 98 aa23.14■■□□□ 1.29
CCM2-211ENST00000478582 CDH20Q9HBT6 801 aa23.14■■□□□ 1.29
CCM2-211ENST00000478582 ATPIF1Q9UII2 106 aa23.14■■□□□ 1.29
CCM2-211ENST00000478582 NDRG4Q9ULP0 352 aaKnown RBP23.14■■□□□ 1.29
CCM2-211ENST00000478582 SPEF1Q9Y4P9 236 aa23.14■■□□□ 1.29
CCM2-211ENST00000478582 LOC100509620A0A075B734 347 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 RER1O15258 196 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 SYNGR3O43761 229 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 TLX2O43763 284 aaPredicted RBP23.13■■□□□ 1.29
CCM2-211ENST00000478582 DOK2O60496 412 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 PCSK6P29122 969 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 GSTT1P30711 240 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 APOBEC3AP31941 199 aaPredicted RBP23.13■■□□□ 1.29
CCM2-211ENST00000478582 ZIK1Q3SY52 487 aaPredicted RBP23.13■■□□□ 1.29
CCM2-211ENST00000478582 LYPD4Q6UWN0 246 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 PACRGLQ8N7B6 248 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 BBS1Q8NFJ9 593 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 OR2AJ1Q8NGZ0 328 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 RDH12Q96NR8 316 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 MBOAT4Q96T53 435 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 TOR3AQ9H497 397 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 HEATR1Q9H583 2144 aaKnown RBP23.13■■□□□ 1.29
CCM2-211ENST00000478582 ZNF442Q9H7R0 627 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 WDR76Q9H967 626 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 CA10Q9NS85 328 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 FAIMQ9NVQ4 179 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 PLEK2Q9NYT0 353 aa23.13■■□□□ 1.29
CCM2-211ENST00000478582 OR6C6A6NF89 314 aa23.12■■□□□ 1.29
CCM2-211ENST00000478582 SMPD2O60906 423 aa23.12■■□□□ 1.29
CCM2-211ENST00000478582 TMCC2O75069 709 aa23.12■■□□□ 1.29
CCM2-211ENST00000478582 CCL2P13500 99 aa23.12■■□□□ 1.29
CCM2-211ENST00000478582 ENTPD1P49961 510 aa23.12■■□□□ 1.29
CCM2-211ENST00000478582 GDI2P50395 445 aaKnown RBP23.12■■□□□ 1.29
CCM2-211ENST00000478582 GALK2Q01415 458 aa23.12■■□□□ 1.29
CCM2-211ENST00000478582 RAB35Q15286 201 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms