RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 RFX4Q33E94 735 aa11.79□□□□□ -0.52
HDAC7-222ENST00000477937 MBNL2Q5VZF2 373 aaKnown RBP11.79□□□□□ -0.52
HDAC7-222ENST00000477937 DNM1P34Q6PK57 102 aa11.79□□□□□ -0.52
HDAC7-222ENST00000477937 CYP2R1Q6VVX0 501 aa11.79□□□□□ -0.52
HDAC7-222ENST00000477937 PTCHD4Q6ZW05 846 aa11.79□□□□□ -0.52
HDAC7-222ENST00000477937 ARHGAP24Q8N264 748 aa11.79□□□□□ -0.52
HDAC7-222ENST00000477937 ABHD4Q8TB40 342 aa11.79□□□□□ -0.52
HDAC7-222ENST00000477937 SLC25A40Q8TBP6 338 aa11.79□□□□□ -0.52
HDAC7-222ENST00000477937 KLF14Q8TD94 323 aaPredicted RBP11.79□□□□□ -0.52
HDAC7-222ENST00000477937 C4orf45Q96LM5 186 aa11.79□□□□□ -0.52
HDAC7-222ENST00000477937 SOX7Q9BT81 388 aa11.79□□□□□ -0.52
HDAC7-222ENST00000477937 OR2J1Q9GZK6 312 aa11.79□□□□□ -0.52
HDAC7-222ENST00000477937 NUAK2Q9H093 628 aa11.79□□□□□ -0.52
HDAC7-222ENST00000477937 OR52D1Q9H346 318 aa11.79□□□□□ -0.52
HDAC7-222ENST00000477937 ZNF275Q9NSD4 429 aaPredicted RBP11.79□□□□□ -0.52
HDAC7-222ENST00000477937 COA3Q9Y2R0 106 aaPredicted RBP11.79□□□□□ -0.52
HDAC7-222ENST00000477937 PLSCR5A0PG75 271 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 H3BSA7 217 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 ARPC3O15145 178 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 TPD52L2O43399 206 aaKnown RBP11.78□□□□□ -0.52
HDAC7-222ENST00000477937 KRT36O76013 467 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 PPP1R3DO95685 299 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 ABHD16AO95870 558 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 NGFP01138 241 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 HNF1AP20823 631 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 FPR3P25089 353 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 CRABP1P29762 137 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 IL2RGP31785 369 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 LIPAP38571 399 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 MPV17P39210 176 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 HTR5AP47898 357 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 ZNF81P51508 661 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 GLO1Q04760 184 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 MTX3Q5HYI7 312 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 C1orf94Q6P1W5 598 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 RFPL4BQ6ZWI9 263 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 LINC01356Q8N9X3 169 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 CCDC197Q8NCU1 140 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 FANK1Q8TC84 345 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 GNPDA2Q8TDQ7 276 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 IPCEF1Q8WWN9 437 aaPredicted RBP11.78□□□□□ -0.52
HDAC7-222ENST00000477937 YIPF5Q969M3 257 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 MUC13Q9H3R2 512 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 CYSLTR2Q9NS75 346 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 DECR2Q9NUI1 292 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 TBCCD1Q9NVR7 557 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 PLEK2Q9NYT0 353 aa11.78□□□□□ -0.52
HDAC7-222ENST00000477937 PPIHO43447 177 aaKnown RBP11.77□□□□□ -0.53
HDAC7-222ENST00000477937 MPZL1O95297 269 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 RENP00797 406 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 TUBG1P23258 451 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 IGFBP5P24593 272 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 NOS3P29474 1203 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 CRYBB2P43320 205 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 GSSP48637 474 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 CENPAP49450 140 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 HMGA2P52926 109 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 TSPAN31Q12999 210 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 CCNIQ14094 377 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 KCNMB1Q16558 191 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 FAM120AOSQ5T036 256 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 LEG1Q6P5S2 330 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 PGM2L1Q6PCE3 622 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 VASH1Q7L8A9 365 aaPredicted RBP11.77□□□□□ -0.53
HDAC7-222ENST00000477937 JAZF1Q86VZ6 243 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 LINC00471Q8N535 108 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 SAMD8Q96LT4 415 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 TSSK2Q96PF2 358 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 MDFIQ99750 246 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 IFT27Q9BW83 186 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 SAP30LQ9HAJ7 183 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 SRA1Q9HD15 236 aaKnown RBP11.77□□□□□ -0.53
HDAC7-222ENST00000477937 TUBG2Q9NRH3 451 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 ASH2LQ9UBL3 628 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 CGGBP1Q9UFW8 167 aaPredicted RBP11.77□□□□□ -0.53
HDAC7-222ENST00000477937 POLR1DQ9Y2S0 133 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 GRIP1Q9Y3R0 1128 aa11.77□□□□□ -0.53
HDAC7-222ENST00000477937 TANC2Q9HCD6 1990 aa11.76□□□□□ -0.53
HDAC7-222ENST00000477937 IGHV1-69-2A0A0G2JMI3 117 aa11.76□□□□□ -0.53
HDAC7-222ENST00000477937 TNFRSF11BO00300 401 aa11.76□□□□□ -0.53
HDAC7-222ENST00000477937 SPRY3O43610 288 aa11.76□□□□□ -0.53
HDAC7-222ENST00000477937 IDH3BO43837 385 aa11.76□□□□□ -0.53
HDAC7-222ENST00000477937 CDC14BO60729 498 aa11.76□□□□□ -0.53
HDAC7-222ENST00000477937 RP2O75695 350 aa11.76□□□□□ -0.53
HDAC7-222ENST00000477937 HIST1H1CP16403 213 aaKnown RBP11.76□□□□□ -0.53
HDAC7-222ENST00000477937 SRD5A1P18405 259 aa11.76□□□□□ -0.53
HDAC7-222ENST00000477937 GSTM3P21266 225 aa11.76□□□□□ -0.53
HDAC7-222ENST00000477937 CALB2P22676 271 aa11.76□□□□□ -0.53
HDAC7-222ENST00000477937 MMP15P51511 669 aa11.76□□□□□ -0.53
HDAC7-222ENST00000477937 CDH15P55291 814 aa11.76□□□□□ -0.53
HDAC7-222ENST00000477937 TRIM25Q14258 630 aaKnown RBP11.76□□□□□ -0.53
HDAC7-222ENST00000477937 TSTQ16762 297 aaKnown RBP11.76□□□□□ -0.53
HDAC7-222ENST00000477937 FAM209AQ5JX71 171 aa11.76□□□□□ -0.53
HDAC7-222ENST00000477937 PGBD2Q6P3X8 592 aa11.76□□□□□ -0.53
HDAC7-222ENST00000477937 DHFR2Q86XF0 187 aa11.76□□□□□ -0.53
HDAC7-222ENST00000477937 NPEPL1Q8NDH3 523 aa11.76□□□□□ -0.53
HDAC7-222ENST00000477937 CLDND2Q8NHS1 167 aa11.76□□□□□ -0.53
HDAC7-222ENST00000477937 GTF3AQ92664 365 aaKnown RBP11.76□□□□□ -0.53
HDAC7-222ENST00000477937 POP5Q969H6 163 aaKnown RBP11.76□□□□□ -0.53
HDAC7-222ENST00000477937 C1orf159Q96HA4 380 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms