RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 RNFT2Q96EX2 444 aa8.57□□□□□ -1.04
NIFK-205ENST00000477693 PLPPR2Q96GM1 343 aa8.57□□□□□ -1.04
NIFK-205ENST00000477693 TMEM204Q9BSN7 226 aa8.57□□□□□ -1.04
NIFK-205ENST00000477693 YIPF3Q9GZM5 350 aa8.57□□□□□ -1.04
NIFK-205ENST00000477693 OR51V1Q9H2C8 321 aa8.57□□□□□ -1.04
NIFK-205ENST00000477693 MARCH7Q9H992 704 aa8.57□□□□□ -1.04
NIFK-205ENST00000477693 GLTPQ9NZD2 209 aa8.57□□□□□ -1.04
NIFK-205ENST00000477693 DNAJC27Q9NZQ0 273 aa8.57□□□□□ -1.04
NIFK-205ENST00000477693 ST6GALNAC2Q9UJ37 374 aa8.57□□□□□ -1.04
NIFK-205ENST00000477693 EDARQ9UNE0 448 aa8.57□□□□□ -1.04
NIFK-205ENST00000477693 B9D1Q9UPM9 204 aa8.57□□□□□ -1.04
NIFK-205ENST00000477693 ERGIC3Q9Y282 383 aa8.57□□□□□ -1.04
NIFK-205ENST00000477693 SLC25A15Q9Y619 301 aa8.57□□□□□ -1.04
NIFK-205ENST00000477693 OTOGQ6ZRI0 2925 aa8.57□□□□□ -1.04
NIFK-205ENST00000477693 CSMD1Q96PZ7 3565 aa8.57□□□□□ -1.04
NIFK-205ENST00000477693 HRNRQ86YZ3 2850 aaPredicted RBP8.56□□□□□ -1.04
NIFK-205ENST00000477693 XPNPEP2O43895 674 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 SLC16A7O60669 478 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 SERPINI2O75830 405 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 RAB36O95755 333 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 SBK2P0C263 348 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 NPR2P20594 1047 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 GSTT1P30711 240 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 RPL5P46777 297 aaKnown RBP8.56□□□□□ -1.04
NIFK-205ENST00000477693 CSNK1A1P48729 337 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 SH3BGRP55822 239 aaPredicted RBP8.56□□□□□ -1.04
NIFK-205ENST00000477693 RPS7P62081 194 aaKnown RBP8.56□□□□□ -1.04
NIFK-205ENST00000477693 ROR2Q01974 943 aaKnown RBP8.56□□□□□ -1.04
NIFK-205ENST00000477693 MRPL28Q13084 256 aaKnown RBP8.56□□□□□ -1.04
NIFK-205ENST00000477693 KCNMB1Q16558 191 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 SMN1Q16637 294 aaKnown RBP8.56□□□□□ -1.04
NIFK-205ENST00000477693 NCMAPQ5T1S8 102 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 C10orf128Q5T292 105 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 C9orf135Q5VTT2 229 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 PAMR1Q6UXH9 720 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 SHFQ7M4L6 423 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 SLC16A9Q7RTY1 509 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 DPPA2Q7Z7J5 298 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 C20orf196Q8IYI0 205 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 OR6V1Q8N148 313 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 GPR137CQ8N3F9 429 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 CYB561A3Q8NBI2 242 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 NOXO1Q8NFA2 376 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 PROKR2Q8NFJ6 384 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 OR6N1Q8NGY5 312 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 ASB17Q8WXJ9 295 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 TMEM54Q969K7 222 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 NMD3Q96D46 503 aaKnown RBP8.56□□□□□ -1.04
NIFK-205ENST00000477693 TXNDC15Q96J42 360 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 SIGLEC11Q96RL6 698 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 CNN2Q99439 309 aaKnown RBP8.56□□□□□ -1.04
NIFK-205ENST00000477693 OCSTAMPQ9BR26 566 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 EMC6Q9BV81 110 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 NUAK2Q9H093 628 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 SYT4Q9H2B2 425 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 LIME1Q9H400 295 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 ESRP2Q9H6T0 727 aaKnown RBP8.56□□□□□ -1.04
NIFK-205ENST00000477693 OBP2BQ9NPH6 170 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 RPRD1BQ9NQG5 326 aaKnown RBP8.56□□□□□ -1.04
NIFK-205ENST00000477693 SLC17A5Q9NRA2 495 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 MED29Q9NX70 200 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 NPAP1Q9NZP6 1156 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 NDUFA13Q9P0J0 144 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 AMDHD2Q9Y303 409 aa8.56□□□□□ -1.04
NIFK-205ENST00000477693 ZFHX3Q15911 3703 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 ARPC4-TTLL3A0A0A6YYG9 625 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 IGLV1-36A0A0B4J1U3 117 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 TMEM129A0AVI4 362 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 FAM183AA6NL82 134 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 J3QRE1 110 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 IGHA1P01876 353 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 RAF1P04049 648 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 ZNF823P16415 610 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 JUNBP17275 347 aaPredicted RBP8.55□□□□□ -1.04
NIFK-205ENST00000477693 PAX7P23759 505 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 HOXC12P31275 282 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 ZNF84P51523 738 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 LSM6P62312 80 aaKnown RBP8.55□□□□□ -1.04
NIFK-205ENST00000477693 TBCEQ15813 527 aaPredicted RBP8.55□□□□□ -1.04
NIFK-205ENST00000477693 LCE2AQ5TA79 106 aaPredicted RBP8.55□□□□□ -1.04
NIFK-205ENST00000477693 LINC01590Q5TEZ4 76 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 ANKRD16Q6P6B7 361 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 TMEM154Q6P9G4 183 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 TMPRSS11AQ6ZMR5 421 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 ZNF704Q6ZNC4 412 aaPredicted RBP8.55□□□□□ -1.04
NIFK-205ENST00000477693 AHSA2Q719I0 299 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 WDFY1Q8IWB7 410 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 SPARTQ8N0X7 666 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 WDR31Q8NA23 367 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 OR1K1Q8NGR3 316 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 OR52N5Q8NH56 324 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 MCHR2Q969V1 340 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 LGALS12Q96DT0 336 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 MND1Q9BWT6 205 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 CRLF2Q9HC73 371 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 GPR35Q9HC97 309 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 SRA1Q9HD15 236 aaKnown RBP8.55□□□□□ -1.04
NIFK-205ENST00000477693 RNF115Q9Y4L5 304 aa8.55□□□□□ -1.04
NIFK-205ENST00000477693 CCDC182A6NF36 153 aa8.54□□□□□ -1.04
NIFK-205ENST00000477693 DPRXA6NFQ7 191 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms