RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 TRAPPC2LH3BP13 241 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 PSMD9O00233 223 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 SDHDO14521 159 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 TPST2O60704 377 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 AGR2O95994 175 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 BGLAPP02818 100 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 BPGMP07738 259 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 NUDT17P0C025 328 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 NR2F1P10589 423 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 CD79AP11912 226 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 B4GALT1P15291 398 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF250P15622 560 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF43P17038 809 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 HOXB9P17482 250 aaPredicted RBP3.85□□□□□ -1.79
CKS1B-207ENST00000477676 MDKP21741 143 aaPredicted RBP3.85□□□□□ -1.79
CKS1B-207ENST00000477676 PCMT1P22061 227 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 PRTN3P24158 256 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 LIPAP38571 399 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 CRYBB2P43320 205 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 CAPZA2P47755 286 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 PTDSS1P48651 473 aaKnown RBP3.85□□□□□ -1.79
CKS1B-207ENST00000477676 KRTAP10-3P60369 221 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 MRPS11P82912 194 aaKnown RBP3.85□□□□□ -1.79
CKS1B-207ENST00000477676 GSG1Q2KHT4 349 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 SMU1Q2TAY7 513 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 ACSM5Q6NUN0 579 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 MZT2AQ6P582 158 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 UGT2A3Q6UWM9 527 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 C6orf89Q6UWU4 347 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF813Q6ZN06 617 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF771Q7L3S4 317 aaPredicted RBP3.85□□□□□ -1.79
CKS1B-207ENST00000477676 SKA3Q8IX90 412 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 GPR137CQ8N3F9 429 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 OR52P1PQ8NH57 321 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 SLC38A5Q8WUX1 472 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 SLC41A3Q96GZ6 507 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 TMEM19Q96HH6 336 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 SNX22Q96L94 193 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 RHOXF2Q9BQY4 288 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 TAPBPLQ9BX59 468 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 SUCNR1Q9BXA5 334 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 OR51B6Q9H340 312 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF385DQ9H6B1 395 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 PDP1Q9P0J1 537 aaPredicted RBP3.85□□□□□ -1.79
CKS1B-207ENST00000477676 TAAR3PQ9P1P4 343 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 ARMCX1Q9P291 453 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 BTNL2Q9UIR0 455 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 LEF1Q9UJU2 399 aaPredicted RBP3.85□□□□□ -1.79
CKS1B-207ENST00000477676 MID2Q9UJV3 735 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 WIPI2Q9Y4P8 454 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 TET2Q6N021 2002 aaPredicted RBP3.85□□□□□ -1.79
CKS1B-207ENST00000477676 LYSTQ99698 3801 aa3.85□□□□□ -1.79
CKS1B-207ENST00000477676 A0A087WUJ7 227 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 A0A0G2JMP0 313 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 A0A0X1KG70 313 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 A0A1B0GWA3 101 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 E9PBE3 544 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 M0R3H8 397 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 AIM2O14862 343 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 TYROBPO43914 113 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 TPST1O60507 370 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 LYPD3O95274 346 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 AHSA1O95433 338 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 SERPINA5P05154 406 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 BCHEP06276 602 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 ERCC1P07992 297 aaPredicted RBP3.84□□□□□ -1.79
CKS1B-207ENST00000477676 IGHV4-38-2P0DP08 117 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 OMGP23515 440 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 PAX7P23759 505 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 KRTAP5-9P26371 169 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 S100A3P33764 101 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 SERPINB5P36952 375 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 MPV17P39210 176 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 SEC61A1P61619 476 aaKnown RBP3.84□□□□□ -1.79
CKS1B-207ENST00000477676 LCN2P80188 198 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 HPCAP84074 193 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 PAX2Q02962 417 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 GLO1Q04760 184 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 MAD2L1Q13257 205 aaPredicted RBP3.84□□□□□ -1.79
CKS1B-207ENST00000477676 CAMK2DQ13557 499 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 TRMT5Q32P41 509 aaKnown RBP3.84□□□□□ -1.79
CKS1B-207ENST00000477676 LIN52Q52LA3 116 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF311Q5JNZ3 666 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 ANXA8L1Q5VT79 327 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 DCAF12L2Q5VW00 463 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 HIST2H2BDQ6DRA6 164 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 LEG1Q6P5S2 330 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF621Q6ZSS3 439 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 H1FNTQ75WM6 255 aaPredicted RBP3.84□□□□□ -1.79
CKS1B-207ENST00000477676 MAVSQ7Z434 540 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 FAM90A1Q86YD7 464 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 IFT20Q8IY31 132 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 CCDC36Q8IYA8 594 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 PEX5LQ8IYB4 626 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF440Q8IYI8 595 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 LRRC34Q8IZ02 419 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 BPIFB2Q8N4F0 458 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 LRRC17Q8N6Y2 441 aa3.84□□□□□ -1.79
CKS1B-207ENST00000477676 RNF152Q8N8N0 203 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms