RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 PSKH1P11801 424 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 COX6B1P14854 86 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 CRYGSP22914 178 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 HTR1FP30939 366 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 ARR3P36575 388 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 IDH3GP51553 393 aaPredicted RBP13.35□□□□□ -0.27
SEC13-215ENST00000477547 NUDT6P53370 316 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 GGTLC2Q14390 218 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 OCLNQ16625 522 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 RHOXF1Q8NHV9 184 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 CNIH3Q8TBE1 160 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 FAM222BQ8WU58 562 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 CNN2Q99439 309 aaKnown RBP13.35□□□□□ -0.27
SEC13-215ENST00000477547 C1QTNF6Q9BXI9 259 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 ANKRD60Q9BZ19 345 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 MARCH7Q9H992 704 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 SLC24A3Q9HC58 644 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 NGBQ9NPG2 151 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 B3GNT2Q9NY97 397 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 WARS2Q9UGM6 360 aaKnown RBP13.35□□□□□ -0.27
SEC13-215ENST00000477547 HSPE1-MOB4S4R3N1 261 aa13.35□□□□□ -0.27
SEC13-215ENST00000477547 CCDC168Q8NDH2 2452 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 CADP27708 2225 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 DCHS2Q6V1P9 2916 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 SNTNA6NMZ2 147 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 CASKO14936 926 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 DOK2O60496 412 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 CBR1P16152 277 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 RAB1AP62820 205 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 ZNF91Q05481 1191 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 PABPC1L2AQ5JQF8 200 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 SLC25A30Q5SVS4 291 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 SLC18B1Q6NT16 456 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 CORO6Q6QEF8 472 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 SYT9Q86SS6 491 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 TIGD4Q8IY51 512 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 OR2AJ1Q8NGZ0 328 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 Q96MT0 163 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 TEAD3Q99594 435 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 SPOCK3Q9BQ16 436 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 WACQ9BTA9 647 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 CDADC1Q9BWV3 514 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 OR2H1Q9GZK4 316 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 GDF2Q9UK05 429 aaPredicted RBP13.34□□□□□ -0.27
SEC13-215ENST00000477547 FBXL3Q9UKT7 428 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 RAB26Q9ULW5 256 aa13.34□□□□□ -0.27
SEC13-215ENST00000477547 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.34□□□□□ -0.27
SEC13-215ENST00000477547 SGCEO43556 437 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 WBP4O75554 376 aaKnown RBP13.33□□□□□ -0.28
SEC13-215ENST00000477547 APOL3O95236 402 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 IGKV3-15P01624 115 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 CELA3BP08861 270 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 EPXP11678 715 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 PAX7P23759 505 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 ISL1P61371 349 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 POU4F2Q12837 409 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 RAB39AQ14964 217 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 RAB35Q15286 201 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 BEX5Q5H9J7 111 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 CFAP77Q6ZQR2 320 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 DPY19L4Q7Z388 723 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 THAP5Q7Z6K1 395 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 MYPOPQ86VE0 399 aaPredicted RBP13.33□□□□□ -0.28
SEC13-215ENST00000477547 OR51G2Q8NGK0 314 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 AKR7LQ8NHP1 331 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 WNT5BQ9H1J7 359 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 ADGRL4Q9HBW9 690 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 PLEK2Q9NYT0 353 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 CRNNQ9UBG3 495 aaPredicted RBP13.33□□□□□ -0.28
SEC13-215ENST00000477547 KCNN3Q9UGI6 736 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 CYB5R1Q9UHQ9 305 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 TIMM10BQ9Y5J6 103 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 TACC2O95359 2948 aa13.33□□□□□ -0.28
SEC13-215ENST00000477547 MTORP42345 2549 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 IGHV1-18A0A0C4DH31 117 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 IQCMA0A1B0GVH7 501 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.32□□□□□ -0.28
SEC13-215ENST00000477547 ZNF593O00488 134 aaPredicted RBP13.32□□□□□ -0.28
SEC13-215ENST00000477547 RER1O15258 196 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 TMCC2O75069 709 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 IGLV1-44P01699 117 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 CECR9P0C854 216 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 DBTP11182 482 aaKnown RBP13.32□□□□□ -0.28
SEC13-215ENST00000477547 ZNF14P17017 642 aaPredicted RBP13.32□□□□□ -0.28
SEC13-215ENST00000477547 MYF6P23409 242 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 HTR5AP47898 357 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 MTNR1AP48039 350 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 PSG4Q00888 419 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 PLP2Q04941 152 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 TMED1Q13445 227 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 EIF2B1Q14232 305 aaKnown RBP13.32□□□□□ -0.28
SEC13-215ENST00000477547 SMN1Q16637 294 aaKnown RBP13.32□□□□□ -0.28
SEC13-215ENST00000477547 TEX30Q5JUR7 227 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 ZNF774Q6NX45 483 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 TMEM108Q6UXF1 575 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 SHFQ7M4L6 423 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 SLC16A9Q7RTY1 509 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 DCXRQ7Z4W1 244 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 FAM169BQ8N8A8 192 aa13.32□□□□□ -0.28
SEC13-215ENST00000477547 GJC3Q8NFK1 279 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms